RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 MTHFD1LQ6UB35 978 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 SERPINA13PQ6UXR4 307 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 CATSPERGQ6ZRH7 1159 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 C8orf58Q8NAV2 365 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 STRBPQ96SI9 672 aaKnown RBP6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 INO80BQ9C086 356 aaPredicted RBP6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 RGS17Q9UGC6 210 aaPredicted RBP6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 POC1B-GALNT4F8VUJ3 575 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 ANXA2P07355 339 aaKnown RBP6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 CYP2A6P11509 494 aaPredicted RBP6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 MTHFSP49914 203 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 SUMO2P61956 95 aaKnown RBP6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 SSBP2P81877 361 aaPredicted RBP6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 ZNF543Q08ER8 600 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 COBLL1Q53SF7 1204 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 MTX3Q5HYI7 312 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 SLC2A7Q6PXP3 512 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 CLEC9AQ6UXN8 241 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 SFTPA1Q8IWL2 248 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 GALNT4Q8N4A0 578 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 HIST1H2AAQ96QV6 131 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 SELENOOQ9BVL4 669 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 SLC29A3Q9BZD2 475 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 UNKQ9C0B0 810 aaKnown RBP6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 CAPN11Q9UMQ6 739 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 HPSEQ9Y251 543 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 SLC27A6Q9Y2P4 619 aa6.24□□□□□ -1.41
SCARNA1-201ENST00000517138 CACNA1IQ9P0X4 2223 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 SMIM35A0A1B0GVV1 85 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 AQP7P3A6NL99 342 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 INO80B-WBP1J3KQ70 363 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 PPP6CO00743 305 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 IL18RAPO95256 599 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 HTR7P34969 479 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 ARHGAP25P42331 645 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 PRIM2P49643 509 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 EZH2Q15910 746 aaKnown RBP6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 FAM187BQ17R55 369 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 SLC18B1Q6NT16 456 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 RNF44Q7L0R7 432 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 NEK8Q86SG6 692 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 RNF152Q8N8N0 203 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 TTC17Q96AE7 1141 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 KLHL13Q9P2N7 655 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 MGAT4CQ9UBM8 478 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 DNAJB11Q9UBS4 358 aa6.23□□□□□ -1.41
SCARNA1-201ENST00000517138 POM121BA6NF01 834 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 TP73O15350 636 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 CDK4P11802 303 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 TSHRP16473 764 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 ATF7P17544 494 aaPredicted RBP6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 KELP23276 732 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 ZNF81P51508 661 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 CASP5P51878 434 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 HNRNPA0Q13151 305 aaKnown RBP6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 KLF9Q13886 244 aaPredicted RBP6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 RAB11FIP4Q86YS3 637 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 LINC01465Q8N7H1 131 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 MAFAQ8NHW3 353 aaPredicted RBP6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 LRRC46Q96FV0 321 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 PRR11Q96HE9 360 aaPredicted RBP6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 C8orf48Q96LL4 319 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 TBCBQ99426 244 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 SARGQ9BW04 601 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 NAA15Q9BXJ9 866 aaKnown RBP6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 FAM83DQ9H4H8 585 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 PNPLA8Q9NP80 782 aa6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 ZNF70Q9UC06 446 aaPredicted RBP6.22□□□□□ -1.41
SCARNA1-201ENST00000517138 PMM2O15305 246 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 CA12O43570 354 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 MT-CO3P00414 261 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 TUBB4AP04350 444 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 MYL3P08590 195 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 RPL17P18621 184 aaKnown RBP6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 COPAP53621 1224 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 SEC23BQ15437 767 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 KIAA1614Q5VZ46 1190 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 GRHL2Q6ISB3 625 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 C1QL2Q7Z5L3 287 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 EFHD1Q9BUP0 239 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 TFCP2L1Q9NZI6 479 aa6.21□□□□□ -1.42
SCARNA1-201ENST00000517138 GCATO75600 419 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 CERS1P27544 350 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 ATICP31939 592 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 CRTC1Q6UUV9 634 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 CCDC33Q8N5R6 958 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 ATP11CQ8NB49 1132 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 ADAMTS18Q8TE60 1221 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 SMCR8Q8TEV9 937 aaPredicted RBP6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 PNISRQ8TF01 805 aaKnown RBP6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 IQCDQ96DY2 449 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 KAZALD1Q96I82 304 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 C1QTNF7Q9BXJ2 289 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 NKX1-2Q9UD57 310 aaPredicted RBP6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
SCARNA1-201ENST00000517138 KCNU1A8MYU2 1149 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 M0R3H8 397 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 PRAMEF2O60811 474 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 INMTO95050 263 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 ARP10275 920 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms