RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 VNN2O95498 520 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 F11P03951 625 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CYP1A1P04798 512 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GLI1P08151 1106 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SLC2A3P11169 496 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 KRT3P12035 628 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GJA1P17302 382 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CHRNB2P17787 502 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ABCB4P21439 1286 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MMP8P22894 467 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SP100P23497 879 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SDC4P31431 198 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CDH5P33151 784 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SSR1P43307 286 aaKnown RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MAGEA1P43355 309 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NOP2P46087 812 aaKnown RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CACNA2D1P54289 1103 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DAOAP59103 153 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NOMO3P69849 1222 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GPC5P78333 572 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 COG7P83436 770 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CYP4F8P98187 520 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CENPCQ03188 943 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DLX2Q07687 328 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 EFEMP1Q12805 493 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MAPK8IP2Q13387 824 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 KCNC3Q14003 757 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TEAD2Q15562 447 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SLC18A3Q16572 532 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 IFI16Q16666 785 aaKnown RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PKDCCQ504Y2 493 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DCAF6Q58WW2 860 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ODF2Q5BJF6 829 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 BSPRYQ5W0U4 402 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TXNDC8Q6A555 127 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PM20D1Q6GTS8 502 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TMEM110Q86TL2 294 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PHF13Q86YI8 300 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MIB1Q86YT6 1006 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CCDC117Q8IWD4 279 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TC2NQ8N9U0 490 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SMRP1Q8NCR6 262 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZMIZ2Q8NF64 920 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ITFG1Q8TB96 612 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ATXN2LQ8WWM7 1075 aaKnown RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DDX1Q92499 740 aaKnown RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 EDEM1Q92611 657 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZNF707Q96C28 371 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TRIM44Q96DX7 344 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MSLNLQ96KJ4 702 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CPXM1Q96SM3 734 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NCAPGQ9BPX3 1015 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZSWIM1Q9BR11 485 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TTLL2Q9BWV7 592 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SLC4A5Q9BY07 1137 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DCLK3Q9C098 648 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 S1PR5Q9H228 398 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 KIF9Q9HAQ2 790 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 POPDC2Q9HBU9 364 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZFP14Q9HCL3 533 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 AVENQ9NQS1 362 aaPredicted RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ASNSD1Q9NWL6 643 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 RRN3Q9NYV6 651 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CLIC5Q9NZA1 410 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CTTNBP2NLQ9P2B4 639 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ARHGAP20Q9P2F6 1191 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CNOT8Q9UFF9 292 aaKnown RBP5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 LCMT1Q9UIC8 334 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CDH7Q9ULB5 785 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TSC2P49815 1807 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NCANO14594 1321 aa5.71□□□□□ -1.5
SCARNA16.4-201ENST00000516956 VWA8A3KMH1 1905 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SYNJ2BP-COX16A0A087WUM0 186 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 A0A087X0T9 212 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SLC12A8A0AV02 714 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TYW5A2RUC4 315 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GRXCR2A6NFK2 248 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 EIF3CLB5ME19 914 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DDX3XO00571 662 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SLC9A3R1O14745 358 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ARHGAP6O43182 974 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TLR5O60602 858 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GRAP2O75791 330 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 F9P00740 461 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 APOEP02649 317 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ERBB2P04626 1255 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 HMBSP08397 361 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PLEKP08567 350 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CFHP08603 1231 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 FAM228BP0C875 321 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 IRF1P10914 325 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 UNGP13051 313 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 LAMP2P13473 410 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PDGFRAP16234 1089 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 HMGA1P17096 107 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CEBPBP17676 345 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NOS2P35228 1153 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 LTBRP36941 435 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms