RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 NFATC1O95644 943 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 STAU1O95793 577 aaKnown RBP8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 ABL1P00519 1130 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 PROS1P07225 676 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 GBP1P32455 592 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 ABCD1P33897 745 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 DHPSP49366 369 aaPredicted RBP8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 NOVA1P51513 510 aaKnown RBP8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 ASIC1P78348 528 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 BNC1Q01954 994 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 PEAR1Q5VY43 1037 aaPredicted RBP8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 EGFLAMQ63HQ2 1017 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 SCARA5Q6ZMJ2 495 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 C4orf50Q6ZRC1 276 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 HS2ST1Q7LGA3 356 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 ACOT1Q86TX2 421 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 FAM35AQ86V20 835 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 TTC30AQ86WT1 665 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 RBBP8NLQ8NC74 664 aaPredicted RBP8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 PNKPQ96T60 521 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 KLF16Q9BXK1 252 aaPredicted RBP8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 TNMDQ9H2S6 317 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 KCTD10Q9H3F6 313 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 VRTNQ9H8Y1 702 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 CAPN10Q9HC96 672 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 ARHGEF4Q9NR80 690 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 PILRBQ9UKJ0 227 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 RAD54BQ9Y620 910 aa8.79□□□□□ -1
SCARNA20.3-201ENST00000516913 CABIN1Q9Y6J0 2220 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 A8MXQ7 604 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 EIF3DO15371 548 aaKnown RBP eCLIP8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 POLR2DO15514 142 aaKnown RBP8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 CYP26A1O43174 497 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 GJB3O75712 270 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 TNNC2P02585 160 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 IRF1P10914 325 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 MBL2P11226 248 aaPredicted RBP8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ADH5P11766 374 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 CD59P13987 128 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 TNNI1P19237 187 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 YWHAQP27348 245 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 GRIA2P42262 883 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 AFMP43652 599 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ASPAP45381 313 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 SLC5A3P53794 718 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 MRPS21P82921 87 aaKnown RBP8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ZNF252P-AS1Q0IIN9 211 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 FOXC1Q12948 553 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 MYO1EQ12965 1108 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ALCAMQ13740 583 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 UNC13DQ70J99 1090 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 MARCH9Q86YJ5 346 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 C12orf56Q8IXR9 622 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 CCDC65Q8IXS2 484 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 NUP93Q8N1F7 819 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 XXYLT1Q8NBI6 393 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 SLC2A14Q8TDB8 520 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 HMGB4Q8WW32 186 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ACDQ96AP0 544 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 INTS4Q96HW7 963 aaKnown RBP8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 CAMK1GQ96NX5 476 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 SCNM1Q9BWG6 230 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 SNX25Q9H3E2 840 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 CSNK1G1Q9HCP0 422 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 CALCOCO1Q9P1Z2 691 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 SERTAD1Q9UHV2 236 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 KLK13Q9UKR3 277 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ZMIZ1Q9ULJ6 1067 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ZDHHC9Q9Y397 364 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 PCDH15Q96QU1 1955 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 ACACAQ13085 2346 aa8.78□□□□□ -1
SCARNA20.3-201ENST00000516913 TNRC6BQ9UPQ9 1833 aaKnown RBP8.77□□□□□ -1
SCARNA20.3-201ENST00000516913 IGHV1OR15-9A0A0B4J2B8 117 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 TCRBV21S2A2A0A5A6 115 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 E2F8A0AVK6 867 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 TRIM66O15016 1216 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 HOXC11O43248 304 aaPredicted RBP8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 HYAL3O43820 417 aaPredicted RBP8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 PPP6R2O75170 966 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 GABBR2O75899 941 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 RHOBTB1O94844 696 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 FAM163BP0C2L3 166 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 PRR29P0C7W0 189 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 ENGP17813 658 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 NDUFV2P19404 249 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 MAOBP27338 520 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 MAPK8P45983 427 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 NDST1P52848 882 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 PPP3CAQ08209 521 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 SEMA3BQ13214 749 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 NCOA4Q13772 614 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 STK38Q15208 465 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 ELF2Q15723 593 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 KNOP1Q1ED39 458 aaKnown RBP8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 UAP1L1Q3KQV9 507 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 USP39Q53GS9 565 aaKnown RBP8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 TRIM61Q5EBN2 209 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 RESP18Q5W5W9 173 aa8.77□□□□□ -1.01
SCARNA20.3-201ENST00000516913 TMEM215Q68D42 235 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms