RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 EPN3Q9H201 632 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 MVB12BQ9H7P6 319 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 PLAC1Q9HBJ0 212 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 SIRT3Q9NTG7 399 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 PPP1R1BQ9UD71 204 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZNF282Q9UDV7 671 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 PRSS50Q9UI38 385 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 GABRQQ9UN88 632 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 KIR2DL5BA0A0G2JN68 375 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 KIR2DL5BA0A0G2JPC4 375 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 E9PLN8 166 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZNF354AO60765 605 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 DDAH1O94760 285 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 CRYAAP02489 173 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 LCATP04180 440 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 CHRNB1P11230 501 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 ATF7P17544 494 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 SLC9A1P19634 815 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 LPOP22079 712 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 TUBA1BP68363 451 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 TAGLNQ01995 201 aaKnown RBP-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 UTP14CQ5TAP6 766 aaKnown RBP-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 EXOC3L1Q86VI1 746 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 KIR2DL5AQ8N109 375 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 PQLC1Q8N2U9 271 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 XAGE5Q8WWM1 108 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 CD101Q93033 1021 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 PPP1R13BQ96KQ4 1090 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZNF285Q96NJ3 590 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 F2RL3Q96RI0 385 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 VKORC1Q9BQB6 163 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 OCIAD1Q9NX40 245 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 CCNL1Q9UK58 526 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 STRIP2Q9ULQ0 834 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 PCDHGB7Q9Y5F8 929 aa-0.31□□□□□ -2.46
RNU6-539P-201ENST00000516665 ARID1AO14497 2285 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 ST20-MTHFSA0A0A6YYL1 179 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 NDUFAF8A1L188 74 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 PRSS38A1L453 326 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 SPRY3O43610 288 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 IGKV3-11P04433 115 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 P0C879 139 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 MYCLP12524 364 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 APEHP13798 732 aaKnown RBP-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 NAT1P18440 290 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 DGKAP23743 735 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 SHC1P29353 583 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 HOXD3P31249 432 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 TPTEP56180 551 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 PIGFQ07326 219 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 TRAF1Q13077 416 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 PLCB4Q15147 1175 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 CYP1B1Q16678 543 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 SMTNL2Q2TAL5 461 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 KRTAP13-4Q3LI77 160 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZNF394Q53GI3 561 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 TAF2Q6P1X5 1199 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 TMEM65Q6PI78 240 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 EEPD1Q7L9B9 569 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 NOTCH2NLQ7Z3S9 236 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 GLG1Q92896 1179 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZNF496Q96IT1 587 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 ELOVL1Q9BW60 279 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 TM2D2Q9BX73 214 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 IMPG2Q9BZV3 1241 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 GAREM1Q9H706 876 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZMAT4Q9H898 229 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZNF334Q9HCZ1 680 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 CHST11Q9NPF2 352 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZFP57Q9NU63 452 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 SLC45A2Q9UMX9 530 aa-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.32□□□□□ -2.46
RNU6-539P-201ENST00000516665 TRAV20A0A0B4J274 112 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 SPRR5A0A1B0GTR4 108 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 A1L4Q6 167 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 F8W810 466 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 INPPL1O15357 1258 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 AKAP10O43572 662 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 AKR1B10O60218 316 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 PHF2O75151 1096 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 FLYWCH1Q4VC44 716 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 SLC25A30Q5SVS4 291 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 DACT2Q5SW24 774 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 MTHFD1LQ6UB35 978 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 Q6ZTK2 550 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 SLC26A9Q7LBE3 791 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 TICAM1Q8IUC6 712 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 PAQR4Q8N4S7 273 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 IGSF22Q8N9C0 903 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 KIR2DL5BQ8NHK3 375 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 GRAPLQ8TC17 118 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 SORCS1Q8WY21 1168 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 HOXB13Q92826 284 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZNF653Q96CK0 615 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 NTNG2Q96CW9 530 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 SGSM3Q96HU1 749 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 LANCL2Q9NS86 450 aa-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 AGO2Q9UKV8 859 aaKnown RBP-0.33□□□□□ -2.46
RNU6-539P-201ENST00000516665 MACF1Q9UPN3 7388 aaKnown RBP-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms