RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 MAEAQ7L5Y9 396 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 EPM2AIP1Q7L775 607 aaPredicted RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 C16orf71Q8IYS4 520 aaPredicted RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 OR56A3Q8NH54 315 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 MAFAQ8NHW3 353 aaPredicted RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 TRIM43Q96BQ3 446 aaPredicted RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 RTFDC1Q9BY42 306 aaPredicted RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 B3GNT5Q9BYG0 378 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 CDH19Q9H159 772 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 DHX36Q9H2U1 1008 aaKnown RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 DDX56Q9NY93 547 aaKnown RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 DNMT3BQ9UBC3 853 aaKnown RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 LPAR3Q9UBY5 353 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZMYM2Q9UBW7 1377 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 PYCARD-AS1I3L0S3 204 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 ADAM10O14672 748 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 TBX3O15119 743 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 FRS3O43559 492 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 SPRY2O43597 315 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 RRP9O43818 475 aaKnown RBP3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 RASSF9O75901 435 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 OAZ2O95190 189 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 CD19P15391 556 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 HOXD9P28356 352 aaPredicted RBP3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 PTDSS1P48651 473 aaKnown RBP3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 PGDP52209 483 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 CFHR3Q02985 330 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 ARHGEF7Q14155 803 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 KCNB1Q14721 858 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 NPY5RQ15761 445 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 KLHL22Q53GT1 634 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZDHHC24Q6UX98 284 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 OVCH2Q7RTZ1 564 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 UBE2Q1Q7Z7E8 422 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 MICU3Q86XE3 530 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 CHPFQ8IZ52 775 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 SMCR8Q8TEV9 937 aaPredicted RBP3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 MAML1Q92585 1016 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZNF668Q96K58 619 aaPredicted RBP3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 BRIP1Q9BX63 1249 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 FAM83DQ9H4H8 585 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 POT1Q9NUX5 634 aa3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 NKX1-2Q9UD57 310 aaPredicted RBP3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 RGS17Q9UGC6 210 aaPredicted RBP3.57□□□□□ -1.84
RNU4-49P-201ENST00000516080 TTC3P53804 2025 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 USP19O94966 1318 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 A8MVJ9 347 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 FAM227AF5H4B4 570 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 H7C4K7 107 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 EXOC5O00471 708 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 TLR2O60603 784 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 CNOT3O75175 753 aaKnown RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 PIAS2O75928 621 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 INMTO95050 263 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 CCKARP32238 428 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ME1P48163 572 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 SUMO3P55854 103 aaPredicted RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 LINC00205P59089 165 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 RPS13P62277 151 aaKnown RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 HSF1Q00613 529 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 CFHR1Q03591 330 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 SLC29A2Q14542 456 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ST3GAL2Q16842 350 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 TRIM71Q2Q1W2 868 aaKnown RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZNF750Q32MQ0 723 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 AWAT1Q58HT5 328 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 CC2D1BQ5T0F9 858 aaKnown RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 RUSC1-AS1Q66K80 236 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 CXorf57Q6NSI4 855 aaKnown RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 KCTD20Q7Z5Y7 419 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ANKRD13BQ86YJ7 626 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 KIAA0319LQ8IZA0 1049 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 C12orf76Q8N812 135 aaPredicted RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 STAG1Q8WVM7 1258 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 RUNDC1Q96C34 613 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 NMD3Q96D46 503 aaKnown RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 WDYHV1Q96HA8 205 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 HIC2Q96JB3 615 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZBTB45Q96K62 511 aaPredicted RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 STK31Q9BXU1 1019 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ADGRE3Q9BY15 652 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZCWPW1Q9H0M4 648 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 FOXP1Q9H334 677 aaPredicted RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 SACM1LQ9NTJ5 587 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZIM2Q9NZV7 527 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 AFF4Q9UHB7 1163 aaKnown RBP3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZNF580Q9UK33 172 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 HDAC9Q9UKV0 1011 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 TPCN1Q9ULQ1 816 aa3.56□□□□□ -1.84
RNU4-49P-201ENST00000516080 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 CFAP69A5D8W1 941 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 AQP7P3A6NL99 342 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 CLIC1O00299 241 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 MYBP10242 640 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 CTSAP10619 480 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 HGFP14210 728 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 BRAFP15056 766 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 ATF7P17544 494 aaPredicted RBP3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 THBS4P35443 961 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 IGBP1P78318 339 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms