RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 SLC9A1P19634 815 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 MAGEA9P43362 315 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 MTIF2P46199 727 aaKnown RBP16.59■□□□□ 0.25
SERF1B-208ENST00000515588 MTAPQ13126 283 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 GAS6Q14393 721 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 TRIM65Q6PJ69 517 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 CCDC186Q7Z3E2 898 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 RBBP8NLQ8NC74 664 aaPredicted RBP16.59■□□□□ 0.25
SERF1B-208ENST00000515588 UBA3Q8TBC4 463 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 CHRDQ9H2X0 955 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 FBRSL1Q9HCM7 1045 aaKnown RBP16.59■□□□□ 0.25
SERF1B-208ENST00000515588 UBE2TQ9NPD8 197 aaPredicted RBP16.59■□□□□ 0.25
SERF1B-208ENST00000515588 SAMSN1Q9NSI8 373 aaKnown RBP16.59■□□□□ 0.25
SERF1B-208ENST00000515588 CNTN6Q9UQ52 1028 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 ZFHX2Q9C0A1 2572 aaPredicted RBP16.59■□□□□ 0.25
SERF1B-208ENST00000515588 WDR87Q6ZQQ6 2873 aa16.59■□□□□ 0.25
SERF1B-208ENST00000515588 XPO1O14980 1071 aaKnown RBP16.58■□□□□ 0.24
SERF1B-208ENST00000515588 BRD2P25440 801 aaKnown RBP16.58■□□□□ 0.24
SERF1B-208ENST00000515588 PON1P27169 355 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 GJA4P35212 333 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 BCAT1P54687 386 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 CCINQ13939 588 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.24
SERF1B-208ENST00000515588 MIIPQ5JXC2 388 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 CPA6Q8N4T0 437 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 KIAA1958Q8N8K9 716 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 NDRG1Q92597 394 aaKnown RBP16.58■□□□□ 0.24
SERF1B-208ENST00000515588 ATP2A3Q93084 1043 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.58■□□□□ 0.24
SERF1B-208ENST00000515588 NUDT5Q9UKK9 219 aa16.58■□□□□ 0.24
SERF1B-208ENST00000515588 MYO16Q9Y6X6 1858 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 GTPBP10A4D1E9 387 aaKnown RBP16.57■□□□□ 0.24
SERF1B-208ENST00000515588 TRDMT1O14717 391 aaKnown RBP16.57■□□□□ 0.24
SERF1B-208ENST00000515588 MDM4O15151 490 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 GABBR2O75899 941 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 SP9P0CG40 484 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 RARGP13631 454 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 PLA2G4AP47712 749 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 GALK1P51570 392 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 TKTL1P51854 596 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 BST2Q10589 180 aaKnown RBP16.57■□□□□ 0.24
SERF1B-208ENST00000515588 CNGA2Q16280 664 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 EXOC3L4Q17RC7 722 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 GAB4Q2WGN9 574 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 TMEM196Q5HYL7 178 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 PM20D1Q6GTS8 502 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 FSTL4Q6MZW2 842 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 GBP6Q6ZN66 633 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 Q6ZS52 159 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 BHLHA9Q7RTU4 235 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 DDX42Q86XP3 938 aaKnown RBP eCLIP16.57■□□□□ 0.24
SERF1B-208ENST00000515588 FAM114A1Q8IWE2 563 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 ADGRG2Q8IZP9 1017 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 KLF16Q9BXK1 252 aaPredicted RBP16.57■□□□□ 0.24
SERF1B-208ENST00000515588 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 HESX1Q9UBX0 185 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 NAGPAQ9UK23 515 aa16.57■□□□□ 0.24
SERF1B-208ENST00000515588 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.24
SERF1B-208ENST00000515588 E2F8A0AVK6 867 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 LAMTOR5O43504 91 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 GREM1O60565 184 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 MBD3O95983 291 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 CYP17A1P05093 508 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 IRF1P10914 325 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 KRT5P13647 590 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 NBL1P41271 181 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 SLC8A3P57103 927 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 DPY19L2P1Q6NXN4 242 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 KLHDC10Q6PID8 442 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 MAMSTRQ6ZN01 415 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 C11orf57Q6ZUT1 292 aaPredicted RBP16.56■□□□□ 0.24
SERF1B-208ENST00000515588 ZNF276Q8N554 614 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 ENOX1Q8TC92 643 aaKnown RBP16.56■□□□□ 0.24
SERF1B-208ENST00000515588 SLC35F5Q8WV83 523 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 TUBGCP2Q9BSJ2 902 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 ULBP1Q9BZM6 244 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 NACA2Q9H009 215 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 NDST4Q9H3R1 872 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 ACP6Q9NPH0 428 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 C2orf42Q9NWW7 574 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 CLIC5Q9NZA1 410 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 APEX2Q9UBZ4 518 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 AJAP1Q9UKB5 411 aaPredicted RBP16.56■□□□□ 0.24
SERF1B-208ENST00000515588 NFE2L3Q9Y4A8 694 aa16.56■□□□□ 0.24
SERF1B-208ENST00000515588 BECN2A8MW95 431 aa16.55■□□□□ 0.24
SERF1B-208ENST00000515588 KCNJ18B7U540 433 aa16.55■□□□□ 0.24
SERF1B-208ENST00000515588 SLC9A3R1O14745 358 aaPredicted RBP16.55■□□□□ 0.24
SERF1B-208ENST00000515588 NFATC1O95644 943 aa16.55■□□□□ 0.24
SERF1B-208ENST00000515588 ZBED1O96006 694 aa16.55■□□□□ 0.24
SERF1B-208ENST00000515588 SETSIPP0DME0 302 aa16.55■□□□□ 0.24
SERF1B-208ENST00000515588 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
SERF1B-208ENST00000515588 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
SERF1B-208ENST00000515588 ATP5C1P36542 298 aaKnown RBP16.55■□□□□ 0.24
SERF1B-208ENST00000515588 PSEN1P49768 467 aa16.55■□□□□ 0.24
SERF1B-208ENST00000515588 LRRC32Q14392 662 aa16.55■□□□□ 0.24
SERF1B-208ENST00000515588 KCNJ12Q14500 433 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms