RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 ADCY7P51828 1080 aa6□□□□□ -1.45
NUP54-218ENST00000515460 INHBCP55103 352 aa6□□□□□ -1.45
NUP54-218ENST00000515460 OCRLQ01968 901 aa6□□□□□ -1.45
NUP54-218ENST00000515460 SPP2Q13103 211 aa6□□□□□ -1.45
NUP54-218ENST00000515460 ESRP1Q6NXG1 681 aaKnown RBP6□□□□□ -1.45
NUP54-218ENST00000515460 CNNM4Q6P4Q7 775 aa6□□□□□ -1.45
NUP54-218ENST00000515460 DZIP1Q86YF9 867 aaKnown RBP6□□□□□ -1.45
NUP54-218ENST00000515460 TMPRSS6Q8IU80 811 aa6□□□□□ -1.45
NUP54-218ENST00000515460 SMC5Q8IY18 1101 aa6□□□□□ -1.45
NUP54-218ENST00000515460 ZGPATQ8N5A5 531 aaKnown RBP6□□□□□ -1.45
NUP54-218ENST00000515460 EFHBQ8N7U6 833 aa6□□□□□ -1.45
NUP54-218ENST00000515460 DTNBP1Q96EV8 351 aa6□□□□□ -1.45
NUP54-218ENST00000515460 THOC1Q96FV9 657 aaKnown RBP6□□□□□ -1.45
NUP54-218ENST00000515460 BICD1Q96G01 975 aa6□□□□□ -1.45
NUP54-218ENST00000515460 OSBPL5Q9H0X9 879 aaPredicted RBP6□□□□□ -1.45
NUP54-218ENST00000515460 ZNF703Q9H7S9 590 aaPredicted RBP6□□□□□ -1.45
NUP54-218ENST00000515460 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6□□□□□ -1.45
NUP54-218ENST00000515460 MUTYHQ9UIF7 546 aa6□□□□□ -1.45
NUP54-218ENST00000515460 PNMA2Q9UL42 364 aa6□□□□□ -1.45
NUP54-218ENST00000515460 ATP8A1Q9Y2Q0 1164 aa6□□□□□ -1.45
NUP54-218ENST00000515460 COMMD10Q9Y6G5 202 aa6□□□□□ -1.45
NUP54-218ENST00000515460 TENM4Q6N022 2769 aa6□□□□□ -1.45
NUP54-218ENST00000515460 PDS5AQ29RF7 1337 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 OTOFQ9HC10 1997 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 A0A1B0GUL6 1792 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 GOLGA6L10A6NI86 522 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 EIF3CLB5ME19 914 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 PRPF6O94906 941 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 APOL3O95236 402 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 CCDC159P0C7I6 412 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 ATP2A2P16615 1042 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 STIP1P31948 543 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 ACTN2P35609 894 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 RARSP54136 660 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 ANTXR2P58335 489 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 BPIFB4P59827 614 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 MTX1Q13505 466 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 MYBPC3Q14896 1274 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 IQCB1Q15051 598 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 MAN2A1Q16706 1144 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 FAM110CQ1W6H9 321 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 GAGE13Q4V321 117 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 CREB3L3Q68CJ9 461 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 KIAA1841Q6NSI8 718 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 SPATA21Q7Z572 469 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 TADA2BQ86TJ2 420 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 HSCBQ8IWL3 235 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 AMOTL1Q8IY63 956 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 ANKRD35Q8N283 1001 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 JAKMIP2Q96AA8 810 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 COA7Q96BR5 231 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 NEUROD6Q96NK8 337 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 EIF3CQ99613 913 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 API5Q9BZZ5 524 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 BATF3Q9NR55 127 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 USP36Q9P275 1121 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 MCM8Q9UJA3 840 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 ITGB1BP2Q9UKP3 347 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 MYO6Q9UM54 1294 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 BARX2Q9UMQ3 279 aaPredicted RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 TNNQ9UQP3 1299 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 DSPP15924 2871 aaKnown RBP5.99□□□□□ -1.45
NUP54-218ENST00000515460 TEX15Q9BXT5 2789 aa5.99□□□□□ -1.45
NUP54-218ENST00000515460 CEP295Q9C0D2 2601 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 ECM29Q5VYK3 1845 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 TMEM221A6NGB7 291 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 F8VZ95 297 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 GOLGA6L19H0YKK7 550 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 M0R296 226 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MAP4K4O95819 1239 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 LDHCP07864 332 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 GNAI3P08754 354 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 KCNA2P16389 499 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MCAMP43121 646 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 GCLCP48506 637 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 RAB27AP51159 221 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 SCNN1BP51168 640 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 KPNA1P52294 538 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 HMGCS2P54868 508 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 SLC8A3P57103 927 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 DSG1Q02413 1049 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 DMWDQ09019 674 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 G3BP1Q13283 466 aaKnown RBP eCLIP5.98□□□□□ -1.45
NUP54-218ENST00000515460 LRRC32Q14392 662 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MVPQ14764 893 aaKnown RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 SHROOM1Q2M3G4 852 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 TKFCQ3LXA3 575 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MICALCLQ6ZW33 695 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 GAREM2Q75VX8 874 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 ZNF627Q7L945 461 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 KANSL1Q7Z3B3 1105 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 FAM114A1Q8IWE2 563 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 ELOA2Q8IYF1 753 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 ANKRD53Q8N9V6 530 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 SPATA5Q8NB90 893 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 PLA2G15Q8NCC3 412 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 FAM76AQ8TAV0 307 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms