RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 NSUN2Q08J23 767 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 PTK2BQ14289 1009 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 PWP2Q15269 919 aaKnown RBP6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 GORABQ5T7V8 394 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 ANO1Q5XXA6 986 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 LIN54Q6MZP7 749 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 NKAPQ8N5F7 415 aaKnown RBP6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 SUN3Q8TAQ9 357 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 FAM71BQ8TC56 605 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 PDLIM2Q96JY6 352 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 WDR24Q96S15 920 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 ALG13Q9NP73 1137 aaKnown RBP6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 TMOD4Q9NZQ9 345 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 GABRQQ9UN88 632 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 SH2B3Q9UQQ2 575 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 EXOC5O00471 708 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 CCNT2O60583 730 aaKnown RBP6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 URI1O94763 535 aaPredicted RBP6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 NXPH3O95157 252 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 ITGA5P08648 1049 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 VEGFAP15692 232 aaPredicted RBP6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 NPPBP16860 134 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 TYRP1P17643 537 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 SERPINF1P36955 418 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 GRIA3P42263 894 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 HALP42357 657 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 MTHFSP49914 203 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 MTAPQ13126 283 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 LAIR1Q6GTX8 287 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 USP51Q70EK9 711 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 MYCT1Q8N699 235 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 OR1N1Q8NGS0 311 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 CTHRC1Q96CG8 243 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 RSPRY1Q96DX4 576 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 PRR25Q96S07 402 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 PRPF18Q99633 342 aaKnown RBP6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 CHMP4AQ9BY43 222 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 MYH16Q9H6N6 1097 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 FSCN3Q9NQT6 498 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 ARHGEF3Q9NR81 526 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 SERTAD4Q9NUC0 356 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 DLL3Q9NYJ7 618 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 LRFN1Q9P244 771 aa6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 MORC2Q9Y6X9 1032 aaPredicted RBP6.03□□□□□ -1.44
HMGCS1-207ENST00000514610 SPRY2O43597 315 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 SNX2O60749 519 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 FZD7O75084 574 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 ONECUT2O95948 504 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 PDE1AP54750 535 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 ZXDAP98168 799 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 E2F1Q01094 437 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 ZNF169Q14929 603 aaPredicted RBP6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 INO80DQ53TQ3 878 aaPredicted RBP6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 TLDC1Q6P9B6 456 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 Q6ZWC4 215 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 ZNF551Q7Z340 670 aaPredicted RBP6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 LDLRAD3Q86YD5 345 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 LRRC71Q8N4P6 559 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 MAGEH1Q9H213 219 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 EPS8L2Q9H6S3 715 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 DACT1Q9NYF0 836 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 LRIT1Q9P2V4 623 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 CA14Q9ULX7 337 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 ST3GAL5Q9UNP4 418 aa6.02□□□□□ -1.45
HMGCS1-207ENST00000514610 H0YIZ8 118 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 AP4M1O00189 453 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 FOXN1O15353 648 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 PMPCBO75439 489 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 USP1O94782 785 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 NTSR2O95665 410 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 VIPP01282 170 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 SRGAP2BP0DMP2 458 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 PROZP22891 400 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 GKP32189 559 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 MCM5P33992 734 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 ACVRL1P37023 503 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 PBX1P40424 430 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 TPTEP56180 551 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 SIM1P81133 766 aaPredicted RBP6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 KLF10Q13118 480 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 CLCA4Q14CN2 919 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 ACOX1Q15067 660 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 PDCD2Q16342 344 aaPredicted RBP6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 RASGRP3Q8IV61 690 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 FSTL5Q8N475 847 aaPredicted RBP6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 ABHD5Q8WTS1 349 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 GRAMD1AQ96CP6 724 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 TTPALQ9BTX7 342 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 KATNAL1Q9BW62 490 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 TOR3AQ9H497 397 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 TRIM36Q9NQ86 728 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 LPAR3Q9UBY5 353 aa6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 ING1Q9UK53 422 aaPredicted RBP6.01□□□□□ -1.45
HMGCS1-207ENST00000514610 J3KTA2 159 aa6□□□□□ -1.45
HMGCS1-207ENST00000514610 ZSCAN9O15535 394 aaPredicted RBP6□□□□□ -1.45
HMGCS1-207ENST00000514610 WDR47O94967 919 aa6□□□□□ -1.45
HMGCS1-207ENST00000514610 TJP3O95049 919 aa6□□□□□ -1.45
HMGCS1-207ENST00000514610 GLP2RO95838 553 aa6□□□□□ -1.45
HMGCS1-207ENST00000514610 EBLN1P0CF75 366 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms