RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 OSBPL7Q9BZF2 842 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 SNX25Q9H3E2 840 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 GDAP2Q9NXN4 497 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 SAMD15Q9P1V8 674 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 XPO7Q9UIA9 1087 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 TCP11X1B4DZS4 312 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 H7C0C1 242 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SMAPO00193 183 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 APOL1O14791 398 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 FSBPO95073 299 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 LCP1P13796 627 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 DESP17661 470 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 TGM2P21980 687 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PNPLA4P41247 253 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PTPN9P43378 593 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ATP5OP48047 213 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 TAF6P49848 677 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 CRYBB1P53674 252 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PKN2Q16513 984 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ANKRD20A8PQ5CZ79 823 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 EFHC2Q5JST6 749 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ARHGEF18Q6ZSZ5 1173 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SLC26A9Q7LBE3 791 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 RASAL3Q86YV0 1011 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ADGRF2Q8IZF7 708 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PDIK1LQ8N165 341 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 FBXO36Q8NEA4 188 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PCDH19Q8TAB3 1148 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SLC2A14Q8TDB8 520 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PYROXD1Q8WU10 500 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 CKAP2Q8WWK9 683 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 MRRFQ96E11 262 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ELAC2Q9BQ52 826 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 C11orf84Q9BUA3 381 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 KATNAL1Q9BW62 490 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ADAM33Q9BZ11 813 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 NKIRAS1Q9NYS0 192 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ZMYND8Q9ULU4 1186 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 GOLGA6L7A0A1B0GV03 622 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 MAP3K6O95382 1288 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 TKTP29401 623 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SSTR1P30872 391 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 HOXC8P31273 242 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 STX2P32856 288 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PHBP35232 272 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 RGS2P41220 211 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 RPL34P49207 117 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ATXN1P54253 815 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 BCAR1P56945 870 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PURAQ00577 322 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 RNASELQ05823 741 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 KCNJ11Q14654 390 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 EFTUD2Q15029 972 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 FSCN1Q16658 493 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 BBS9Q3SYG4 887 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SV2CQ496J9 727 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PPP6R3Q5H9R7 873 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 FAM182AQ5T1J6 154 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SLC9A4Q6AI14 798 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 TWF2Q6IBS0 349 aaKnown RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 LIMS2Q7Z4I7 341 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 VSIG1Q86XK7 387 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ANKS4BQ8N8V4 417 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 TSPAN18Q96SJ8 248 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 APBA2Q99767 749 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 ZNF670Q9BS34 389 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 TRABDQ9H4I3 376 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PPCSQ9HAB8 311 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 KIF9Q9HAQ2 790 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 USP29Q9HBJ7 922 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 FGFR1OP2Q9NVK5 253 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 PSMC3IPQ9P2W1 217 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-211ENST00000514439 SLC24A2Q9UI40 661 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 RABGEF1Q9UJ41 708 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 Q9Y3F1 56 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 HEY1Q9Y5J3 304 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 CAPN7Q9Y6W3 813 aa8.54□□□□□ -1.04
CPNE4-211ENST00000514439 FAM47DPA6NHR8 397 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 PTGESO14684 152 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 KCNN4O15554 427 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 HUS1O60921 280 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 SPAG7O75391 227 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 KRT15P19012 456 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 SCNN1AP37088 669 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ZNF157P51786 506 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 GEMIN4P57678 1058 aaKnown RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 LILRA4P59901 499 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ITIH4Q14624 930 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 RASA2Q15283 850 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 SYCP2LQ5T4T6 812 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 C17orf99Q6UX52 265 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 PPP1R21Q6ZMI0 780 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 C3orf62Q6ZUJ4 267 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 FAM228AQ86W67 206 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 OSTM1Q86WC4 334 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 NME8Q8N427 588 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms