RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 KIR2DL1P43626 348 aaPredicted RBP12.93□□□□□ -0.34
SNHG4-208ENST00000514110 ASPAP45381 313 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 TUBP50607 506 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 MAP3K7CLP57077 242 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 CEP135Q66GS9 1140 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 PMS2CLQ68D20 193 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 SV2AQ7L0J3 742 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 CRYBG2Q8N1P7 616 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 NAT16Q8N8M0 369 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 C12orf29Q8N999 325 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 SLC2A14Q8TDB8 520 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 DDX1Q92499 740 aaKnown RBP12.93□□□□□ -0.34
SNHG4-208ENST00000514110 CSNK1G1Q9HCP0 422 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.346e-39■□□□□ 8.9
SNHG4-208ENST00000514110 ARHGEF4Q9NR80 690 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 COMMD8Q9NX08 183 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 HPSEQ9Y251 543 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 SH3BP1Q9Y3L3 701 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 MYOFQ9NZM1 2061 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 ADAM23O75077 832 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
SNHG4-208ENST00000514110 HLA-DRAP01903 254 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 P4HA1P13674 534 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 ADORA2BP29275 332 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 PIK3CAP42336 1068 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 TNFRSF4P43489 277 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 GAD2Q05329 585 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 N4BP2L1Q5TBK1 243 aaPredicted RBP12.92□□□□□ -0.34
SNHG4-208ENST00000514110 RNF43Q68DV7 783 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 ETFBKMTQ8IXQ9 262 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 OLIG1Q8TAK6 271 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 RLN3Q8WXF3 142 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 TAF4BQ92750 862 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 OTUB2Q96DC9 234 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 EDEM2Q9BV94 578 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 USP25Q9UHP3 1055 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
SNHG4-208ENST00000514110 LNP1A1A4G5 178 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-208ENST00000514110 PATE3B3GLJ2 98 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 HHLA1C9JL84 531 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 IKBKBO14920 756 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 TRIM24O15164 1050 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-208ENST00000514110 GREM1O60565 184 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 TLR5O60602 858 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 KRT37O76014 449 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 ALDH1A2O94788 518 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 TBX18O95935 607 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 MYL1P05976 194 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 VAMP7P51809 220 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 ANO4Q32M45 955 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 HSF5Q4G112 596 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-208ENST00000514110 CLEC20AQ6ZU45 233 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 C11orf74Q86VG3 221 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 FRMD1Q8N878 549 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 SPATA32Q96LK8 384 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 DUSP9Q99956 384 aaKnown RBP12.91□□□□□ -0.34
SNHG4-208ENST00000514110 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
SNHG4-208ENST00000514110 NACA2Q9H009 215 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 FBXO44Q9H4M3 255 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 APOBEC3GQ9HC16 384 aaKnown RBP12.91□□□□□ -0.34
SNHG4-208ENST00000514110 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 OSER1Q9NX31 292 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 TRAF3IP3Q9Y228 551 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 FRMD4BQ9Y2L6 1034 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 ABCA7Q8IZY2 2146 aa12.91□□□□□ -0.34
SNHG4-208ENST00000514110 NUP205Q92621 2012 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 C4orf47A7E2U8 309 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 MAPK13O15264 365 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 CYP26A1O43174 497 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 CALUO43852 315 aaPredicted RBP12.9□□□□□ -0.34
SNHG4-208ENST00000514110 TULP3O75386 442 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 RHOBTB3O94955 611 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 KCNK5O95279 499 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 FAM200BP0CF97 657 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 NR2F2P24468 414 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 PMLP29590 882 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 P2RY2P41231 377 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 SYKP43405 635 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 GCLMP48507 274 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 DHPSP49366 369 aaPredicted RBP12.9□□□□□ -0.34
SNHG4-208ENST00000514110 NDUFA8P51970 172 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 PPP3CAQ08209 521 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 INCA1Q0VD86 236 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 DPYDQ12882 1025 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 EOGTQ5NDL2 527 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 BTBD8Q5XKL5 378 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 TAS1R2Q8TE23 839 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 HMGB4Q8WW32 186 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms