RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 NHLH1Q02575 133 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 CENPCQ03188 943 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 RAB41Q5JT25 222 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 EFHC1Q5JVL4 640 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 ATAT1Q5SQI0 421 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 OR6B2Q6IFH4 312 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 TOGARAM2Q6ZUX3 1019 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 H2AFVQ71UI9 128 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 TADA2BQ86TJ2 420 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 SCUBE3Q8IX30 993 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 STKLD1Q8NE28 680 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 PDZD8Q8NEN9 1154 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 FEZF2Q8TBJ5 459 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 CTNNBL1Q8WYA6 563 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-214ENST00000513989 OVCA2Q8WZ82 227 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 IRGQQ8WZA9 623 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 PSMG2Q969U7 264 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 GCNAQ96QF7 691 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 EIF3CQ99613 913 aaKnown RBP10.67□□□□□ -0.7
NEDD9-214ENST00000513989 PHF7Q9BWX1 381 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-214ENST00000513989 ISCUQ9H1K1 167 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 CRISPLD1Q9H336 500 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 MRPL47Q9HD33 250 aaKnown RBP10.67□□□□□ -0.7
NEDD9-214ENST00000513989 PARVAQ9NVD7 372 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 TMEM51Q9NW97 253 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 TRPM5Q9NZQ8 1165 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 INTUQ9ULD6 942 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 SCML2Q9UQR0 700 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 SOWAHDA6NJG2 315 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 HHLA1C9JL84 531 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 E5RJQ4 531 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 TULP2O00295 520 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 TNFRSF10BO14763 440 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 LCA5LO95447 670 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 GLI1P08151 1106 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 RALAP11233 206 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 GPR15P49685 360 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 CACNA2D1P54289 1103 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ZXDAP98168 799 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 SLC6A3Q01959 620 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ITIH3Q06033 890 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ADIGQ0VDE8 80 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 IFRD2Q12894 506 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-214ENST00000513989 IER5LQ5T953 404 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 SDHAF4Q5VUM1 108 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 PM20D1Q6GTS8 502 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ANKRD54Q6NXT1 300 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 MMS22LQ6ZRQ5 1243 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 KIAA1328Q86T90 577 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ALYREFQ86V81 257 aaKnown RBP10.66□□□□□ -0.7
NEDD9-214ENST00000513989 MCOLN2Q8IZK6 566 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 SCML4Q8N228 414 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 TTC9BQ8N6N2 239 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ZMIZ2Q8NF64 920 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 SCAMP5Q8TAC9 235 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 GPR152Q8TDT2 470 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 TRMT2BQ96GJ1 504 aaKnown RBP10.66□□□□□ -0.7
NEDD9-214ENST00000513989 CALR3Q96L12 384 aaKnown RBP10.66□□□□□ -0.7
NEDD9-214ENST00000513989 MYRFLQ96LU7 910 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 CPXM1Q96SM3 734 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 CDK5RAP1Q96SZ6 601 aaKnown RBP10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ASAH2Q9NR71 780 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 TLR8Q9NR97 1041 aaKnown RBP10.66□□□□□ -0.7
NEDD9-214ENST00000513989 SPTLC3Q9NUV7 552 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 IL37Q9NZH6 218 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ZMYM5Q9UJ78 669 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 PCDHA13Q9Y5I0 950 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 USP3Q9Y6I4 520 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 SCINQ9Y6U3 715 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 FAM186AA6NE01 2351 aa10.66□□□□□ -0.7
NEDD9-214ENST00000513989 PDCD11Q14690 1871 aaKnown RBP10.66□□□□□ -0.7
NEDD9-214ENST00000513989 ZNF292O60281 2723 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 TMEM221A6NGB7 291 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 M0R296 226 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 CAPN9O14815 690 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 CCP110O43303 1012 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 RFPL2O75678 378 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 ABL1P00519 1130 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 USP17L7P0C7H9 530 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 KRT3P12035 628 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 ATF6P18850 670 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 CDC25CP30307 473 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 SCNN1AP37088 669 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 GALCP54803 685 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 TAF10Q12962 218 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 ARHGAP15Q53QZ3 475 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 HS1BP3Q53T59 392 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 RARS2Q5T160 578 aaKnown RBP10.65□□□□□ -0.7
NEDD9-214ENST00000513989 BTBD8Q5XKL5 378 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 DNAJC24Q6P3W2 148 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 DCUN1D2Q6PH85 259 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 TMC5Q6UXY8 1006 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 TRIM67Q6ZTA4 783 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 PDZD4Q76G19 769 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-214ENST00000513989 BMP8AQ7Z5Y6 402 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 PRSS33Q8NF86 280 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 SMG7Q92540 1137 aaKnown RBP10.65□□□□□ -0.7
NEDD9-214ENST00000513989 ASIC4Q96FT7 647 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 RPGRIP1Q96KN7 1286 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms