RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 YWHAGP61981 247 aaKnown RBP eCLIP11.9□□□□□ -0.5
HTT-213ENST00000513806 PTP4A2Q12974 167 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 SMAD2Q15796 467 aaKnown RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 MEA1Q16626 185 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 ACAD10Q6JQN1 1059 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 CCDC186Q7Z3E2 898 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 TMEM110Q86TL2 294 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 XYLT1Q86Y38 959 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 ARL14EPQ8N8R7 260 aaPredicted RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 HSFY1Q96LI6 401 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 NECAB3Q96P71 396 aaPredicted RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 RNF38Q9H0F5 515 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 FBXO44Q9H4M3 255 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 SLITRK6Q9H5Y7 841 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 SYNCQ9H7C4 482 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 NHEJ1Q9H9Q4 299 aaPredicted RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 UXTQ9UBK9 157 aaPredicted RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 SOWAHDA6NJG2 315 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 PRAMEF12O95522 483 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 LSM8O95777 96 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 FYNP06241 537 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 ZDHHC11BP0C7U3 371 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 RARGP13631 454 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 CDC25CP30307 473 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 VIPR2P41587 438 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 RNASE9P60153 205 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 PITX1P78337 314 aaPredicted RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 MRPS5P82675 430 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 CENPCQ03188 943 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 ASTE1Q2TB18 679 aaPredicted RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 PM20D1Q6GTS8 502 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 OLFML1Q6UWY5 402 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 TRIM72Q6ZMU5 477 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 MON1BQ7L1V2 547 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 TMEM139Q8IV31 216 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 RIN3Q8TB24 985 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 IPO4Q8TEX9 1081 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 STK32AQ8WU08 396 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 RSAD2Q8WXG1 361 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 MRPS31Q92665 395 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.51
HTT-213ENST00000513806 WBP2Q969T9 261 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 FAM149B1Q96BN6 582 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 GCNAQ96QF7 691 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 RPP25Q9BUL9 199 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 PACSIN1Q9BY11 444 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 AVENQ9NQS1 362 aaPredicted RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 CNGB3Q9NQW8 809 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 METTL5Q9NRN9 209 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 ZNHIT6Q9NWK9 470 aaKnown RBP11.89□□□□□ -0.51
HTT-213ENST00000513806 SMPD4Q9NXE4 827 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 ADAM22Q9P0K1 906 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 CCL26Q9Y258 94 aa11.89□□□□□ -0.51
HTT-213ENST00000513806 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 TICRRQ7Z2Z1 1910 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 ZNF197O14709 1029 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 ZNF263O14978 683 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 COCHO43405 550 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
HTT-213ENST00000513806 HMBSP08397 361 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 IRF1P10914 325 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 ABCB4P21439 1286 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 MMP8P22894 467 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 ACADSBP45954 432 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 NSFP46459 744 aaKnown RBP11.88□□□□□ -0.51
HTT-213ENST00000513806 ZXDBP98169 803 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 MAPK8IP2Q13387 824 aaPredicted RBP11.88□□□□□ -0.51
HTT-213ENST00000513806 FAM78AQ5JUQ0 283 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 SYPL2Q5VXT5 272 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 BSPRYQ5W0U4 402 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 TRNP1Q6NT89 227 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 PARM1Q6UWI2 310 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 CYP26C1Q6V0L0 522 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 RAD9BQ6WBX8 426 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 PHF13Q86YI8 300 aaPredicted RBP11.88□□□□□ -0.51
HTT-213ENST00000513806 MCOLN2Q8IZK6 566 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 EMC1Q8N766 993 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 JOSD2Q8TAC2 188 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 ZSCAN18Q8TBC5 510 aaPredicted RBP11.88□□□□□ -0.51
HTT-213ENST00000513806 ADAM32Q8TC27 787 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 C18orf8Q96DM3 657 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 CEP295NLQ96MC4 621 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 NECTIN4Q96NY8 510 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 LRRC3BQ96PB8 259 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 NOX5Q96PH1 765 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 PHF7Q9BWX1 381 aaPredicted RBP11.88□□□□□ -0.51
HTT-213ENST00000513806 PLA2G2FQ9BZM2 168 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 DEF6Q9H4E7 631 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 TASP1Q9H6P5 420 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 TLR8Q9NR97 1041 aaKnown RBP11.88□□□□□ -0.51
HTT-213ENST00000513806 GKN1Q9NS71 199 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms