RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 SNX30Q5VWJ9 437 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
CDK7-208ENST00000512687 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 PDZD8Q8NEN9 1154 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 RUBCNQ92622 972 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 CD101Q93033 1021 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 TATDN2Q93075 761 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 CYFIP2Q96F07 1278 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
CDK7-208ENST00000512687 P2RY13Q9BPV8 354 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 HINFPQ9BQA5 517 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 NT5C1AQ9BXI3 368 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 OSER1Q9NX31 292 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 CEP250Q9BV73 2442 aa12.72□□□□□ -0.37
CDK7-208ENST00000512687 C2orf72A6NCS6 295 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 CYP26A1O43174 497 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 HRO43593 1189 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 NFATC1O95644 943 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 FAM200BP0CF97 657 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 PXNP49023 591 aaPredicted RBP12.71□□□□□ -0.37
CDK7-208ENST00000512687 NRLP54845 237 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 PPP2R5DQ14738 602 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 HECTD3Q5T447 861 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 TCERG1LQ5VWI1 586 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 C12orf40Q86WS4 652 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 SFTPA1Q8IWL2 248 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 SLC35C1Q96A29 364 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 TSG101Q99816 390 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 DUSP9Q99956 384 aaKnown RBP12.71□□□□□ -0.37
CDK7-208ENST00000512687 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 COMMD8Q9NX08 183 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
CDK7-208ENST00000512687 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.38
CDK7-208ENST00000512687 IRF1P10914 325 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 DRD1P21728 446 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 TUBP50607 506 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 RAD23BP54727 409 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 FKBP3Q00688 224 aaKnown RBP12.7□□□□□ -0.38
CDK7-208ENST00000512687 LRRC63Q05C16 580 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 DHCR24Q15392 516 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 WDR5BQ86VZ2 330 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
CDK7-208ENST00000512687 ADGRG2Q8IZP9 1017 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 RPLP0P6Q8NHW5 317 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 NMUR1Q9HB89 426 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 PARD6AQ9NPB6 346 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 NCDNQ9UBB6 729 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
CDK7-208ENST00000512687 E2F8A0AVK6 867 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 K7EQS6 105 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 BIN1O00499 593 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 MDM4O15151 490 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 STX10O60499 249 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 GREM1O60565 184 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 TLR5O60602 858 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 TBX18O95935 607 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 ACO1P21399 889 aaKnown RBP12.69□□□□□ -0.38
CDK7-208ENST00000512687 TGM1P22735 817 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 HOXA6P31267 233 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 SLC6A11P48066 632 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 AMPD2Q01433 879 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 NR1H3Q13133 447 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 MORC3Q14149 939 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 KLHL10Q6JEL2 608 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 TTI2Q6NXR4 508 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 RHBDF2Q6PJF5 856 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 PRR23BQ6ZRT6 265 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 LONP2Q86WA8 852 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK7-208ENST00000512687 BBS7Q8IWZ6 715 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 UBR7Q8N806 425 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 CCDC150Q8NCX0 1101 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 HHIPQ96QV1 700 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 FBXO44Q9H4M3 255 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 PNPLA8Q9NP80 782 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 TLR8Q9NR97 1041 aaKnown RBP12.69□□□□□ -0.38
CDK7-208ENST00000512687 CTNND2Q9UQB3 1225 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 SCML2Q9UQR0 700 aa12.69□□□□□ -0.38
CDK7-208ENST00000512687 A0A1W2PQH9 124 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 PSMA7O14818 248 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 ADH5P11766 374 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 KIF11P52732 1056 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 SEC13P55735 322 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 FBXO43Q4G163 708 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 LY6G5CQ5SRR4 150 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 SCD5Q86SK9 330 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 RMDN1Q96DB5 314 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 TMEM176AQ96HP8 235 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 DHTKD1Q96HY7 919 aaPredicted RBP12.68□□□□□ -0.38
CDK7-208ENST00000512687 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 HEXIM2Q96MH2 286 aaKnown RBP12.68□□□□□ -0.38
CDK7-208ENST00000512687 KLF16Q9BXK1 252 aaPredicted RBP12.68□□□□□ -0.38
CDK7-208ENST00000512687 DUSP16Q9BY84 665 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 CYLDQ9NQC7 956 aa12.68□□□□□ -0.38
CDK7-208ENST00000512687 ARMCX3Q9UH62 379 aaPredicted RBP12.68□□□□□ -0.38
CDK7-208ENST00000512687 HOOK1Q9UJC3 728 aaKnown RBP12.68□□□□□ -0.38
CDK7-208ENST00000512687 NUDT5Q9UKK9 219 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms