RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 STRA6Q9BX79 667 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 SAP130Q9H0E3 1048 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 MUC3BQ9H195 1237 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 TMEM206Q9H813 350 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 KIF9Q9HAQ2 790 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 ABCB6Q9NP58 842 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 RBAKQ9NYW8 714 aaPredicted RBP7.71□□□□□ -1.18
USP46-208ENST00000512656 FBXO2Q9UK22 296 aaPredicted RBP7.71□□□□□ -1.18
USP46-208ENST00000512656 ITGA11Q9UKX5 1188 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 AGAP1Q9UPQ3 857 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 MORC2Q9Y6X9 1032 aaPredicted RBP7.71□□□□□ -1.18
USP46-208ENST00000512656 CNOT1A5YKK6 2376 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 DNAH14Q0VDD8 3507 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 MYMKA6NI61 221 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 TNFRSF10BO14763 440 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 PRAMEF12O95522 483 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 ITGB3P05106 788 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 TMEM191BP0C7N4 346 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 POLR2BP30876 1174 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 SOX9P48436 509 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 LHX1P48742 406 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 NLRP12P59046 1061 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 RBP5P82980 135 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 CEBPZQ03701 1054 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 MYO1EQ12965 1108 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 PON2Q15165 354 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 PDGFRLQ15198 375 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 SURF1Q15526 300 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 FOXD4L6Q3SYB3 417 aaPredicted RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 TXNDC11Q6PKC3 985 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 FOXD4L3Q6VB84 417 aaPredicted RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 CEP68Q76N32 757 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 LRRTM3Q86VH5 581 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 MON1AQ86VX9 555 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 EFCAB13Q8IY85 973 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 PDCL2Q8N4E4 241 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 CSGALNACT2Q8N6G5 542 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 MAB21L3Q8N8X9 362 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 TTC8Q8TAM2 541 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 NOC3LQ8WTT2 800 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 LEO1Q8WVC0 666 aaPredicted RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 DNAJC19Q96DA6 116 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 INTS4Q96HW7 963 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 ANKRD36BP1Q96IX9 119 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 ZFYVE19Q96K21 471 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 LRRC3BQ96PB8 259 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 RTKNQ9BST9 563 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 PI4K2AQ9BTU6 479 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 SLC46A2Q9BY10 475 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 ZSCAN16Q9H4T2 348 aaPredicted RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 KIAA1586Q9HCI6 787 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 GKN1Q9NS71 199 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 RBM12Q9NTZ6 932 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 TDP1Q9NUW8 608 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 PANK4Q9NVE7 773 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 GDAP2Q9NXN4 497 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 DDX43Q9NXZ2 648 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 GTSE1Q9NYZ3 720 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 TBC1D7Q9P0N9 293 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 FNDC3AQ9Y2H6 1198 aaKnown RBP7.7□□□□□ -1.18
USP46-208ENST00000512656 CACNA1BQ00975 2339 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 NCANO14594 1321 aa7.7□□□□□ -1.18
USP46-208ENST00000512656 MED19A0JLT2 244 aaPredicted RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 ZNF233A6NK53 670 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 CHURC1-FNTBB4DL54 471 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 DEAF1O75398 565 aaPredicted RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 TNNC2P02585 160 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 KRT19P08727 400 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 HMGA1P17096 107 aaKnown RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 SYT1P21579 422 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 FNTBP49356 437 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 PDE6CP51160 858 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 ATXN1P54253 815 aaKnown RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 AMPD3Q01432 767 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 TNK2Q07912 1038 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 KCNA1Q09470 495 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 RESTQ13127 1097 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 RUNX3Q13761 415 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 ZNF268Q14587 947 aaPredicted RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 SLC39A14Q15043 492 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 MAPRE1Q15691 268 aaKnown RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 LPAL2Q16609 132 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 ARTNQ5T4W7 220 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 TMEM164Q5U3C3 297 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 HEATR6Q6AI08 1181 aaKnown RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 C4orf50Q6ZRC1 276 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 DPH6Q7L8W6 267 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 WDR5BQ86VZ2 330 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 SPATA2LQ8IUW3 424 aaPredicted RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 ADGRF2Q8IZF7 708 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 GPD1LQ8N335 351 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 TOP6BLQ8N6T0 577 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 C1orf127Q8N9H9 656 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 FSIP1Q8NA03 581 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 OR13H1Q8NG92 308 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 CCDC26Q8TAB7 109 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 NETO1Q8TDF5 533 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 SAAL1Q96ER3 474 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 TRMT2BQ96GJ1 504 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms