RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 OR2I1PQ8NGU4 316 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 RFWD2Q8NHY2 731 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 CCDC110Q8TBZ0 833 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 NEK9Q8TD19 979 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 RNF139Q8WU17 664 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 MRPS27Q92552 414 aaKnown RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 CASP10Q92851 521 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 PDLIM5Q96HC4 596 aaKnown RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 FER1L6-AS2Q96M78 137 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 GCNAQ96QF7 691 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 CTAGE1Q96RT6 745 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 MIPEPQ99797 713 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 ZPBPQ9BS86 351 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 ZNF518BQ9C0D4 1074 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 PCDHAC1Q9H158 963 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 ASCC2Q9H1I8 757 aaPredicted RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 CHST8Q9H2A9 424 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 CDIP1Q9H305 208 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 TP63Q9H3D4 680 aaPredicted RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 ATXN3LQ9H3M9 355 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 PDE11AQ9HCR9 933 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 IL1RAPL2Q9NP60 686 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 SSU72Q9NP77 194 aaKnown RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 POLE3Q9NRF9 147 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 SIRT3Q9NTG7 399 aaPredicted RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 TCP11L1Q9NUJ3 509 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 DDX18Q9NVP1 670 aaKnown RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 NINJ2Q9NZG7 142 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 COX16Q9P0S2 106 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 SEPT10Q9P0V9 454 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 IL19Q9UHD0 177 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 PRSS50Q9UI38 385 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 ATXN7L1Q9ULK2 861 aaPredicted RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 ZMYND8Q9ULU4 1186 aaPredicted RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 DAPP1Q9UN19 280 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 WDR37Q9Y2I8 494 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 ZNF281Q9Y2X9 895 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 MRPL11Q9Y3B7 192 aaKnown RBP3.53□□□□□ -1.84
PVT1-202ENST00000512617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.53□□□□□ -1.84
PVT1-202ENST00000512617 SESN1Q9Y6P5 492 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 DIP2CQ9Y2E4 1556 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 ZNF518AQ6AHZ1 1483 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 MLH3Q9UHC1 1453 aa3.53□□□□□ -1.84
PVT1-202ENST00000512617 CDC42BPAQ5VT25 1732 aa3.53□□□□□ -1.85
PVT1-202ENST00000512617 TRAPPC8Q9Y2L5 1435 aa3.53□□□□□ -1.85
PVT1-202ENST00000512617 ITSN2Q9NZM3 1697 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 ABCA6Q8N139 1617 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 IGSF1Q8N6C5 1336 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 SYNGAP1Q96PV0 1343 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 SAMD9LQ8IVG5 1584 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 A0A087WZ62 844 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 MBD3L4A6NDZ8 208 aaPredicted RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 MBD3L3A6NE82 208 aaPredicted RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 NPIPB15A6NHN6 443 aaPredicted RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 LACTBL1A8MY62 500 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 MYO1GB0I1T2 1018 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 H7BY64 318 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 LINC01387J3KSC0 135 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 SCAMP1O15126 338 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 SLC25A17O43808 307 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 RNGTTO60942 597 aaKnown RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 ADAMTS4O75173 837 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 LRRN2O75325 713 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 RASSF9O75901 435 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 PDE8BO95263 885 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 TRIM16O95361 564 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 GCNT3O95395 438 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 AHSGP02765 367 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 TFRCP02786 760 aaKnown RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 INHBAP08476 426 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 TXNP10599 105 aaKnown RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 BCRP11274 1271 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 XRCC6P12956 609 aaKnown RBP eCLIP3.52□□□□□ -1.85
PVT1-202ENST00000512617 IL1R1P14778 569 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 SYN1P17600 705 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 CCNA2P20248 432 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 MALP21145 153 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 KLRC1P26715 233 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 IL1R2P27930 398 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 LTKP29376 864 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 NOS3P29474 1203 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 ADSSP30520 456 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 GDI1P31150 447 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 RDXP35241 583 aaKnown RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 IL15P40933 162 aaPredicted RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 CTSKP43235 329 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 ZNF81P51508 661 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 POLGP54098 1239 aaPredicted RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 ACTR1AP61163 376 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 MRPS5P82675 430 aaKnown RBP3.52□□□□□ -1.85
PVT1-202ENST00000512617 COG7P83436 770 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 BEX3Q00994 111 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 KIF5AQ12840 1032 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 TDGQ13569 410 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 LAPTM5Q13571 262 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 SNX1Q13596 522 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 ITGA7Q13683 1181 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 TTLL4Q14679 1199 aa3.52□□□□□ -1.85
PVT1-202ENST00000512617 RAB39AQ14964 217 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms