RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 RAPGEF1Q13905 1077 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 FHL2Q14192 279 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ERCC6LQ2NKX8 1250 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 TRIM71Q2Q1W2 868 aaKnown RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ATPAF1Q5TC12 328 aaPredicted RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ERAP2Q6P179 960 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 TLDC1Q6P9B6 456 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 MTHFD1LQ6UB35 978 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 Q6ZNX1 250 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 WDR53Q7Z5U6 358 aaPredicted RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 CAND1Q86VP6 1230 aaKnown RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ZNF354CQ86Y25 554 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 SMAP1Q8IYB5 467 aaPredicted RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 NRSN1Q8IZ57 195 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 TRAPPC12Q8WVT3 735 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 XAGE5Q8WWM1 108 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 PPM1EQ8WY54 764 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 GLG1Q92896 1179 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 PRRX2Q99811 253 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 OBP2BQ9NPH6 170 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 NFU1Q9UMS0 254 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 DRG1Q9Y295 367 aaKnown RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 SNX14Q9Y5W7 946 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 MORC2Q9Y6X9 1032 aaPredicted RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 MAST3O60307 1309 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 A0A087WZ62 844 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 NPC1O15118 1278 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 NPHP1O15259 732 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 NARSO43776 548 aaKnown RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 WDHD1O75717 1129 aaPredicted RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 TTLL1O95922 423 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 HGFP14210 728 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 NPPBP16860 134 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 TGM1P22735 817 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 MST1P26927 711 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 ACVRL1P37023 503 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 DGKQP52824 942 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 HMGA2P52926 109 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 TGFB2P61812 414 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 MRPS35P82673 323 aaKnown RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 FOXO1Q12778 655 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 ATP1A4Q13733 1029 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 PRKG1Q13976 671 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 CSHL1Q14406 222 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 FAM153CQ494X1 144 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 INO80DQ53TQ3 878 aaPredicted RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 TREML2Q5T2D2 321 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 TMEM63BQ5T3F8 832 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 WDR78Q5VTH9 848 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 SLC9A4Q6AI14 798 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 KLHL17Q6TDP4 642 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 USP49Q70CQ1 688 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 ZNF551Q7Z340 670 aaPredicted RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 CCDC117Q8IWD4 279 aaPredicted RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 CPXCR1Q8N123 301 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 LRRC71Q8N4P6 559 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 MYCT1Q8N699 235 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 ATG16L2Q8NAA4 619 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 RP9Q8TA86 221 aaKnown RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 IPO4Q8TEX9 1081 aaKnown RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 SOCS4Q8WXH5 440 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 RSC1A1Q92681 617 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 EID2BQ96D98 161 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 EIF3CQ99613 913 aaKnown RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 NUDT22Q9BRQ3 303 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 MAF1Q9H063 256 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 ARHGEF3Q9NR81 526 aa4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 HERC5Q9UII4 1024 aaKnown RBP4.58□□□□□ -1.68
CALCOCO2-220ENST00000511816 ADGRA2Q96PE1 1338 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 WDR33Q9C0J8 1336 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 PNMA6EA0A0J9YXQ4 647 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 OR2W5A6NFC9 320 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 LGALS16A8MUM7 142 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 GCOM1H8Y6P7 765 aaPredicted RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 EXOC5O00471 708 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 KIAA0355O15063 1070 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 AKAP8O43823 692 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 URI1O94763 535 aaPredicted RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 RHOBTB3O94955 611 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 NTSR2O95665 410 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 ESRRBO95718 433 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 ITGA5P08648 1049 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 NR2F6P10588 404 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 MCCP23508 829 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 PDIA3P30101 505 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 SERPINF1P36955 418 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 HNRNPMP52272 730 aaKnown RBP eCLIP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 SCAPQ12770 1279 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 C4orf46Q504U0 113 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 RAP1GAP2Q684P5 730 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 ANKRD16Q6P6B7 361 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 CLEC9AQ6UXN8 241 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 KRBA2Q6ZNG9 492 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 PARS2Q7L3T8 475 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 ZNF804AQ7Z570 1209 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 SLC44A3Q8N4M1 653 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 NKAPQ8N5F7 415 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 SIRT6Q8N6T7 355 aa4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 PNISRQ8TF01 805 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-220ENST00000511816 RUBCNQ92622 972 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms