RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 O00370 1275 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 SCAMP3O14828 347 aaKnown RBP12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 PAEPP09466 180 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 VDRP11473 427 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 GALK1P51570 392 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 AMPD2Q01433 879 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 CSTF1Q05048 431 aaKnown RBP12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 GOLGA7BQ2TAP0 167 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 GAB4Q2WGN9 574 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 ZNF528Q3MIS6 628 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 PKDCCQ504Y2 493 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 TMEM270Q6UE05 265 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 Q6ZS52 159 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 DDX42Q86XP3 938 aaKnown RBP eCLIP12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 ADGRG2Q8IZP9 1017 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 TFAP2BQ92481 460 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 NELL1Q92832 810 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 WBP2Q969T9 261 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 KIAA1257Q9ULG3 409 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 PCDHB4Q9Y5E5 795 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 PTPRZ1P23471 2315 aaPredicted RBP12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 VPS13AQ96RL7 3174 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 SLC9A3R1O14745 358 aaPredicted RBP12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 XPO1O14980 1071 aaKnown RBP12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 NFATC1O95644 943 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 TDGF1P13385 188 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 CD19P15391 556 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 ERCC5P28715 1186 aaPredicted RBP12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 ZNF132P52740 706 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 PDE4CQ08493 712 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 NR1H3Q13133 447 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 KLHDC10Q6PID8 442 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 TSSK4Q6SA08 328 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 SYNPOQ8N3V7 929 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 SPEM1Q8N4L4 309 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 ZNF276Q8N554 614 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 P2RY13Q9BPV8 354 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 KLF16Q9BXK1 252 aaPredicted RBP12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 THAP9Q9H5L6 903 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 CNTN6Q9UQ52 1028 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 R4GN57 208 aa12.23□□□□□ -0.45
SH3RF1-205ENST00000511421 GREM1O60565 184 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 EGFP01133 1207 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CYP17A1P05093 508 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 RARGP13631 454 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 ATP5C1P36542 298 aaKnown RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 OPRD1P41143 372 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 PSEN1P49768 467 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 BCAT1P54687 386 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 SATB1Q01826 763 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 BST2Q10589 180 aaKnown RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 GRSF1Q12849 480 aaKnown RBP eCLIP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 DHCR24Q15392 516 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 RHBDF2Q6PJF5 856 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 LCLAT1Q6UWP7 414 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 RBM43Q6ZSC3 357 aaKnown RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 ASCL5Q7RTU5 278 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 UBA3Q8TBC4 463 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 EZH1Q92800 747 aaPredicted RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CRACR2AQ9BSW2 395 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CLIC5Q9NZA1 410 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 TBC1D14Q9P2M4 693 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 NUDT5Q9UKK9 219 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 GPR179Q6PRD1 2367 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 PRR23AA6NEV1 266 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 MDM4O15151 490 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 GFRA3O60609 400 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 PAPSS2O95340 614 aaPredicted RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CALCAP01258 141 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 SLC9A1P19634 815 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 DRD1P21728 446 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 PLA2G4AP47712 749 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CXCL12P48061 93 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CCR3P51677 355 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 TKTL1P51854 596 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 SLC8A3P57103 927 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CNGA2Q16280 664 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 PM20D1Q6GTS8 502 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 PKN3Q6P5Z2 889 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 HTR3DQ70Z44 454 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 RBBP8NLQ8NC74 664 aaPredicted RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 ZBTB44Q8NCP5 570 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 CD101Q93033 1021 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 NKD2Q969F2 451 aaPredicted RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 NACA2Q9H009 215 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 UBE2TQ9NPD8 197 aaPredicted RBP12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 HESX1Q9UBX0 185 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 NAGPAQ9UK23 515 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 SH3BP1Q9Y3L3 701 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 USP34Q70CQ2 3546 aa12.22□□□□□ -0.45
SH3RF1-205ENST00000511421 FAM186AA6NE01 2351 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 GTPBP10A4D1E9 387 aaKnown RBP12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 GABBR2O75899 941 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 SETSIPP0DME0 302 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms