RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 TMEM176AQ96HP8 235 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 CEP63Q96MT8 703 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 DUSP16Q9BY84 665 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 NACA2Q9H009 215 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 FAM124BQ9H5Z6 455 aaPredicted RBP24.25■■□□□ 1.47
SNF8-209ENST00000510558 SLC8A2Q9UPR5 921 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 SH3BP1Q9Y3L3 701 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 WDR87Q6ZQQ6 2873 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 CYP26A1O43174 497 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 HRO43593 1189 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 BMP6P22004 513 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 CNR2P34972 360 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 RAD23BP54727 409 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 SRSF5Q13243 272 aaKnown RBP24.24■■□□□ 1.47
SNF8-209ENST00000510558 LPAL2Q16609 132 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 PRR23BQ6ZRT6 265 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 WDR5BQ86VZ2 330 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 SLC4A11Q8NBS3 891 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 RPLP0P6Q8NHW5 317 aa24.24■■□□□ 1.47
SNF8-209ENST00000510558 METTL14Q9HCE5 456 aaKnown RBP24.24■■□□□ 1.47
SNF8-209ENST00000510558 EML5Q05BV3 1969 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 ADH1CP00326 375 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 CUL2Q13617 745 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 MORC3Q14149 939 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 SIM2Q14190 667 aaPredicted RBP24.23■■□□□ 1.47
SNF8-209ENST00000510558 TTI2Q6NXR4 508 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 RHBDF2Q6PJF5 856 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 OTUB2Q96DC9 234 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 DUSP9Q99956 384 aaKnown RBP24.23■■□□□ 1.47
SNF8-209ENST00000510558 CYLDQ9NQC7 956 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 POLR3BQ9NW08 1133 aaPredicted RBP24.23■■□□□ 1.47
SNF8-209ENST00000510558 OSER1Q9NX31 292 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 GMEB2Q9UKD1 530 aa24.23■■□□□ 1.47
SNF8-209ENST00000510558 PPP1R3GB7ZBB8 358 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 BIN1O00499 593 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 TBX18O95935 607 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 IRF1P10914 325 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 ADH5P11766 374 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 KIF11P52732 1056 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 CCDC40Q4G0X9 1142 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 LAIR1Q6GTX8 287 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 NELFBQ8WX92 580 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 WBP2Q969T9 261 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 NMUR1Q9HB89 426 aa24.22■■□□□ 1.47
SNF8-209ENST00000510558 SPAG17Q6Q759 2223 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 A0A1W2PQH9 124 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 ATP5C1P36542 298 aaKnown RBP24.21■■□□□ 1.47
SNF8-209ENST00000510558 ID4P47928 161 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 PXNP49023 591 aaPredicted RBP24.21■■□□□ 1.47
SNF8-209ENST00000510558 FMO5P49326 533 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 LY6G5CQ5SRR4 150 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 ARHGAP17Q68EM7 881 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 FOXR2Q6PJQ5 311 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 SYT13Q7L8C5 426 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 BBS7Q8IWZ6 715 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 CCDC26Q8TAB7 109 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 ACDQ96AP0 544 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 KLF16Q9BXK1 252 aaPredicted RBP24.21■■□□□ 1.47
SNF8-209ENST00000510558 CTNND2Q9UQB3 1225 aa24.21■■□□□ 1.47
SNF8-209ENST00000510558 RALGAPA1Q6GYQ0 2036 aa24.2■■□□□ 1.47
SNF8-209ENST00000510558 FRYLO94915 3013 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 CCDC163A0A0D9SF12 145 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 BICDL2A1A5D9 508 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 K7EQS6 105 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 EIF2DP41214 584 aaKnown RBP24.2■■□□□ 1.46
SNF8-209ENST00000510558 SLC6A11P48066 632 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 CCDC186Q7Z3E2 898 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 C12orf40Q86WS4 652 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 CAMKK1Q8N5S9 505 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 HHIPQ96QV1 700 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.2■■□□□ 1.46
SNF8-209ENST00000510558 USP3Q9Y6I4 520 aa24.2■■□□□ 1.46
SNF8-209ENST00000510558 RARGP13631 454 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 SEC13P55735 322 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 YWHAEP62258 255 aaKnown RBP24.19■■□□□ 1.46
SNF8-209ENST00000510558 LRMPQ12912 555 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 DMC1Q14565 340 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 CEP68Q76N32 757 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 SCD5Q86SK9 330 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 GPR161Q8N6U8 529 aaKnown RBP24.19■■□□□ 1.46
SNF8-209ENST00000510558 USP33Q8TEY7 942 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 PNKPQ96T60 521 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 NAGPAQ9UK23 515 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 NUDT5Q9UKK9 219 aa24.19■■□□□ 1.46
SNF8-209ENST00000510558 PMM2O15305 246 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 TBXAS1P24557 533 aaPredicted RBP24.18■■□□□ 1.46
SNF8-209ENST00000510558 PSEN1P49768 467 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 GAD2Q05329 585 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 GOLGA8FQ08AF8 430 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 GOLGA8DPQ0D2H9 430 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 MESP2Q0VG99 397 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 KLHDC10Q6PID8 442 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 HTR3DQ70Z44 454 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.18■■□□□ 1.46
SNF8-209ENST00000510558 ANKRD52Q8NB46 1076 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 GAB3Q8WWW8 586 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 UBXN6Q9BZV1 441 aa24.18■■□□□ 1.46
SNF8-209ENST00000510558 ANTXRLA6NF34 631 aa24.17■■□□□ 1.46
SNF8-209ENST00000510558 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.17■■□□□ 1.46
SNF8-209ENST00000510558 MDM4O15151 490 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms