RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 A0A1W2PQH9 124 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 FAM170BA6NMN3 283 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 FOXN3O00409 490 aaPredicted RBP12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 TLR5O60602 858 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 SETSIPP0DME0 302 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 ARSAP15289 507 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 CTHP32929 405 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 GPD2P43304 727 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 SOX9P48436 509 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 PSEN1P49768 467 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 TKTL1P51854 596 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 TCF15Q12870 199 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 MEA1Q16626 185 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 EML3Q32P44 896 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 ITPRIPL2Q3MIP1 535 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 TRIM68Q6AZZ1 485 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 TXNDC11Q6PKC3 985 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 RALGPS2Q86X27 583 aaPredicted RBP12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 ADGRG2Q8IZP9 1017 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 PRSS33Q8NF86 280 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 ZNF606Q8WXB4 792 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 PRRX2Q99811 253 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 BPIFA3Q9BQP9 254 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 KLF16Q9BXK1 252 aaPredicted RBP12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 EBF3Q9H4W6 596 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 PLCB1Q9NQ66 1216 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 TAB2Q9NYJ8 693 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 DNAJC12Q9UKB3 198 aa12.37□□□□□ -0.43
HMGXB3-203ENST00000510472 E2F8A0AVK6 867 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 STK25O00506 426 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 ZBED1O96006 694 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 CHRNB1P11230 501 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 RARGP13631 454 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 SLC8A3P57103 927 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 ANO6Q4KMQ2 910 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 C1orf228Q6PIY5 440 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 DHX40Q8IX18 779 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 FAM71AQ8IYT1 594 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 DTWD2Q8NBA8 298 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 STK32AQ8WU08 396 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 FAM3CQ92520 227 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 WBP2Q969T9 261 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 HSFY1Q96LI6 401 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 ULBP1Q9BZM6 244 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 DUS2Q9NX74 493 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 SMPD4Q9NXE4 827 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 CFAP97Q9P2B7 532 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 MRPS17Q9Y2R5 130 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 WNT6Q9Y6F9 365 aa12.36□□□□□ -0.43
HMGXB3-203ENST00000510472 COL4A3Q01955 1670 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 CACNA1HO95180 2353 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 WDFY4Q6ZS81 3184 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 MUC6Q6W4X9 2439 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 TRDMT1O14717 391 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 LETM1O95202 739 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 MBL2P11226 248 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 KRT5P13647 590 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 UCHL3P15374 230 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 CLCN1P35523 988 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 ATP5C1P36542 298 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 RPS9P46781 194 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 KPNA1P52294 538 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 UBXN2BQ14CS0 331 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 IQCB1Q15051 598 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 ARHGAP44Q17R89 818 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 GAB4Q2WGN9 574 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 CC2D1AQ6P1N0 951 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 DENND1BQ6P3S1 775 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 HTR3DQ70Z44 454 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 DDX42Q86XP3 938 aaKnown RBP eCLIP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 WDTC1Q8N5D0 677 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 TTC8Q8TAM2 541 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 VPS16Q9H269 839 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 GANQ9H2C0 597 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 LRRC4Q9HBW1 653 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 CNGB3Q9NQW8 809 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 CYTH4Q9UIA0 394 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 SIK3Q9Y2K2 1263 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 DENND4CQ5VZ89 1909 aa12.35□□□□□ -0.43
HMGXB3-203ENST00000510472 COL4A2P08572 1712 aa12.34□□□□□ -0.43
HMGXB3-203ENST00000510472 M0QYV0 167 aa12.34□□□□□ -0.43
HMGXB3-203ENST00000510472 PTMSP20962 102 aa12.34□□□□□ -0.43
HMGXB3-203ENST00000510472 GJA4P35212 333 aa12.34□□□□□ -0.43
HMGXB3-203ENST00000510472 MAGEA9P43362 315 aa12.34□□□□□ -0.43
HMGXB3-203ENST00000510472 DAOAP59103 153 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms