RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 SCN5AQ14524 2016 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 hCG_1818297A0A087WSY0 165 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 ITGAVP06756 1048 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 STX2P32856 288 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 GJC1P36383 396 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 AFF1P51825 1210 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 RBP5P82980 135 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 ZNF252P-AS1Q0IIN9 211 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 LRRC14Q15048 493 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 MFSD7Q6UXD7 560 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 SPATA21Q7Z572 469 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 TMEM199Q8N511 208 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 CCDC63Q8NA47 563 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 GSTCDQ8NEC7 633 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 CXorf38Q8TB03 319 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 MGARPQ8TDB4 240 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 MAML1Q92585 1016 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 PCDH9Q9HC56 1237 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 FGFR1OP2Q9NVK5 253 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 PRKAG2Q9UGJ0 569 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 DNPEPQ9ULA0 475 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 TPX2Q9ULW0 747 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 AGAP1Q9UPQ3 857 aa16.78■□□□□ 0.28
SQSTM1-213ENST00000510187 TET1Q8NFU7 2136 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 ATP2C2O75185 946 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 THP07101 528 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 CSF2RAP15509 400 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 CREB1P16220 341 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 RDXP35241 583 aaKnown RBP16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 SCNN1GP51170 649 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 RPL7AP62424 266 aaKnown RBP16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 OASLQ15646 514 aaKnown RBP16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 ZNF699Q32M78 642 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 GALNTL6Q49A17 601 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 TFDP3Q5H9I0 405 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 CNKSR3Q6P9H4 555 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 DCUN1D2Q6PH85 259 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 CCDC91Q7Z6B0 441 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 CYP4X1Q8N118 509 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 ANKRD42Q8N9B4 389 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 FAXDC2Q96IV6 333 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 MCEEQ96PE7 176 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 PPP1R10Q96QC0 940 aaKnown RBP16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 XYLT2Q9H1B5 865 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 CISHQ9NSE2 258 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 TMEM161AQ9NX61 479 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 ZNF148Q9UQR1 794 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 INPP5FQ9Y2H2 1132 aa16.77■□□□□ 0.28
SQSTM1-213ENST00000510187 FAM47DPA6NHR8 397 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 PRPF4O43172 522 aaKnown RBP eCLIP16.76■□□□□ 0.271e-8■■■■□ 19.6
SQSTM1-213ENST00000510187 CYP3A5P20815 502 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 SLC8A1P32418 973 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 ELF3P78545 371 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 IL9RQ01113 521 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 RIPK1Q13546 671 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 IKBKEQ14164 716 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 MPP2Q14168 576 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 COL13A1Q5TAT6 717 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 NUGGCQ68CJ6 796 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 PCGF5Q86SE9 256 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 C9orf72Q96LT7 481 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 PWWP2AQ96N64 755 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 TGS1Q96RS0 853 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 ELAC1Q9H777 363 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 YY1AP1Q9H869 796 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 SAYSD1Q9NPB0 183 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 ABCF3Q9NUQ8 709 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 MIOSQ9NXC5 875 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 PRKAG3Q9UGI9 489 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 PCDHB7Q9Y5E2 793 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 TRIP11Q15643 1979 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 EXOC1LA0A1B0GW35 172 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 POMCP01189 267 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 ATICP31939 592 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 CDKN2BP42772 138 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 ARSEP51690 589 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 GSCP56915 257 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 SOX4Q06945 474 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 RNF43Q68DV7 783 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 SRRM1Q8IYB3 904 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 FNIP1Q8TF40 1166 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 VWCEQ96DN2 955 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 HPDLQ96IR7 371 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 FAM118BQ9BPY3 351 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 LHX5Q9H2C1 402 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 GOLGA2P5Q9HBQ8 144 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 PCDH10Q9P2E7 1040 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 FETUBQ9UGM5 382 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 SLC24A2Q9UI40 661 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 LRFN2Q9ULH4 789 aa16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 SMG5Q9UPR3 1016 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-213ENST00000510187 RASA4BC9J798 803 aa16.75■□□□□ 0.27
SQSTM1-213ENST00000510187 ALOX15BO15296 676 aa16.75■□□□□ 0.27
SQSTM1-213ENST00000510187 RASA4O43374 803 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms