RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CYB561D2O14569 222 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 TRIM24O15164 1050 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 DFNA5O60443 496 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 OLFM2O95897 454 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 IGLV3-19P01714 112 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
SNF8-207ENST00000509995 CLTAP09496 248 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 GRIK1P39086 918 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 PEX3P56589 373 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 ERVPABLB-1P60509 514 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 CCT2P78371 535 aaKnown RBP11.56□□□□□ -0.56
SNF8-207ENST00000509995 TLE1Q04724 770 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 SSRP1Q08945 709 aaKnown RBP11.56□□□□□ -0.56
SNF8-207ENST00000509995 MAPK8IP2Q13387 824 aaPredicted RBP11.56□□□□□ -0.56
SNF8-207ENST00000509995 ILKQ13418 452 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 FUT11Q495W5 492 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 KCNT1Q5JUK3 1230 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 PYM1Q9BRP8 204 aaKnown RBP11.56□□□□□ -0.56
SNF8-207ENST00000509995 ESYT1Q9BSJ8 1104 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 MKRN2Q9H000 416 aaKnown RBP11.56□□□□□ -0.56
SNF8-207ENST00000509995 PCED1AQ9H1Q7 454 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 TBC1D14Q9P2M4 693 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 PCDHB1Q9Y5F3 818 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 LACTBL1A8MY62 500 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 GFRA2O00451 464 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 PIRO00625 290 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 MPOP05164 745 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 CPA1P15085 419 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 TXKP42681 527 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 GABREP78334 506 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 INSM1Q01101 510 aaPredicted RBP11.55□□□□□ -0.56
SNF8-207ENST00000509995 MCL1Q07820 350 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 ORC1Q13415 861 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 KRT32Q14532 448 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 EARS2Q5JPH6 523 aaKnown RBP11.55□□□□□ -0.56
SNF8-207ENST00000509995 KDM7AQ6ZMT4 941 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNF8-207ENST00000509995 LSMEM2Q8N112 164 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 OTUB2Q96DC9 234 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 TSPAN18Q96SJ8 248 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 CCSER1Q9C0I3 900 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 RNF38Q9H0F5 515 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 MYH11P35749 1972 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 PLXNA2O75051 1894 aa11.55□□□□□ -0.56
SNF8-207ENST00000509995 WASH3PC4AMC7 463 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 PRRT4C9JH25 899 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 CLDN3O15551 220 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 TRAK2O60296 914 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 ITGB6P18564 788 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 STARD3Q14849 445 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 HIST2H2BCQ6DN03 193 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 GRAMD4Q6IC98 578 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 SCFD1Q8WVM8 642 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 HAPLN2Q9GZV7 340 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 KMT5AQ9NQR1 393 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 DNAJC17Q9NVM6 304 aaKnown RBP11.54□□□□□ -0.56
SNF8-207ENST00000509995 TRPM5Q9NZQ8 1165 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 ADAMTS1Q9UHI8 967 aa11.54□□□□□ -0.56
SNF8-207ENST00000509995 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.54□□□□□ -0.56
SNF8-207ENST00000509995 RBM19Q9Y4C8 960 aaKnown RBP11.54□□□□□ -0.56
SNF8-207ENST00000509995 CENPEQ02224 2701 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 BLACEA4D250 179 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 NEMFO60524 1076 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 OAS1P00973 400 aaKnown RBP11.53□□□□□ -0.56
SNF8-207ENST00000509995 ITGAVP06756 1048 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 ABCB4P21439 1286 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 PDIA3P30101 505 aaKnown RBP11.53□□□□□ -0.56
SNF8-207ENST00000509995 TAF6P49848 677 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 PDIA5Q14554 519 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 ENOX2Q16206 610 aaKnown RBP11.53□□□□□ -0.56
SNF8-207ENST00000509995 ANO4Q32M45 955 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 LINC00303Q3SY05 128 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 CFAP221Q4G0U5 840 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 JADE1Q6IE81 842 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 XKR5Q6UX68 686 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 CCDC81Q6ZN84 652 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 ADAT2Q7Z6V5 191 aaKnown RBP11.53□□□□□ -0.56
SNF8-207ENST00000509995 SCN4BQ8IWT1 228 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 DAW1Q8N136 415 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 EID2Q8N6I1 236 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 SAP25Q8TEE9 199 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 SIPA1Q96FS4 1042 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 LIN37Q96GY3 246 aaPredicted RBP11.53□□□□□ -0.56
SNF8-207ENST00000509995 VCPIP1Q96JH7 1222 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 ELF4Q99607 663 aaPredicted RBP11.53□□□□□ -0.56
SNF8-207ENST00000509995 PKMYT1Q99640 499 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 AGXT2Q9BYV1 514 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 BHMT2Q9H2M3 363 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 C6orf106Q9H6K1 298 aaPredicted RBP11.53□□□□□ -0.56
SNF8-207ENST00000509995 ASCL3Q9NQ33 180 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 SPHK2Q9NRA0 654 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 THSD1Q9NS62 852 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 POLQO75417 2590 aa11.53□□□□□ -0.56
SNF8-207ENST00000509995 ZNF840PA6NDX5 716 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 MT-CO3P00414 261 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 ADRB2P07550 413 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 RPA1P27694 616 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms