RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 LRPAP1P30533 357 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 NTSR1P30989 418 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 NAMPTP43490 491 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 ACADVLP49748 655 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 RCAN1P53805 252 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 NLRP5P59047 1200 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 NPY5RQ15761 445 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 SLC10A6Q3KNW5 377 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 ZNF568Q3ZCX4 644 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 DCAF12L1Q5VU92 463 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 SDHAF4Q5VUM1 108 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 DSTYKQ6XUX3 929 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 FILIP1Q7Z7B0 1213 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 DHX40Q8IX18 779 aaKnown RBP10.32□□□□□ -0.76
PTPN20-223ENST00000509900 MCPH1Q8NEM0 835 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 TOE1Q96GM8 510 aaKnown RBP10.32□□□□□ -0.76
PTPN20-223ENST00000509900 NACC1Q96RE7 527 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 ACOX2Q99424 681 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 STARD5Q9NSY2 213 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 ABI2Q9NYB9 513 aaPredicted RBP10.32□□□□□ -0.76
PTPN20-223ENST00000509900 WSB2Q9NYS7 404 aaPredicted RBP10.32□□□□□ -0.76
PTPN20-223ENST00000509900 EIF2B4Q9UI10 523 aaKnown RBP10.32□□□□□ -0.76
PTPN20-223ENST00000509900 PCDHA4Q9UN74 947 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 ARHGAP26Q9UNA1 814 aa10.32□□□□□ -0.76
PTPN20-223ENST00000509900 CKAP5Q14008 2032 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 METTL12A8MUP2 240 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 H0Y8X5 98 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 K7ENP7 123 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 ABLIM1O14639 778 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 SCAMP3O14828 347 aaKnown RBP10.31□□□□□ -0.76
PTPN20-223ENST00000509900 PPEF2O14830 753 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 KLK10O43240 276 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 CSH1P0DML2 217 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 CSH2P0DML3 217 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 CDK4P11802 303 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 CCT8P50990 548 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 ATP2C1P98194 919 aaPredicted RBP10.31□□□□□ -0.76
PTPN20-223ENST00000509900 IL9RQ01113 521 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 NUCB1Q02818 461 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 SPAG1Q07617 926 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 CREB3L3Q68CJ9 461 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 INO80CQ6PI98 192 aaPredicted RBP10.31□□□□□ -0.76
PTPN20-223ENST00000509900 RHBDF2Q6PJF5 856 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 TRMT11Q7Z4G4 463 aaKnown RBP10.31□□□□□ -0.76
PTPN20-223ENST00000509900 CADM4Q8NFZ8 388 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 SPPL2BQ8TCT7 592 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 ACO2Q99798 780 aaKnown RBP10.31□□□□□ -0.76
PTPN20-223ENST00000509900 SH3GLB2Q9NR46 395 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 SETD2Q9BYW2 2564 aaPredicted RBP10.31□□□□□ -0.76
PTPN20-223ENST00000509900 KIF26BQ2KJY2 2108 aa10.31□□□□□ -0.76
PTPN20-223ENST00000509900 MYH11P35749 1972 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 CCDC196A0A1B0GTZ2 297 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 E2F8A0AVK6 867 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 TBC1D3BA6NDS4 549 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 LEFTY2O00292 366 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 PAPSS1O43252 624 aaPredicted RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 ITGB6P18564 788 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 GLDCP23378 1020 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 GUCY2FP51841 1108 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 EFNA5P52803 228 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 TLE1Q04724 770 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 NTRK3Q16288 839 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 KCNT1Q5JUK3 1230 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 EGFLAMQ63HQ2 1017 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 KIAA1324Q6UXG2 1013 aaKnown RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 BLIDQ8IZY5 108 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 C2orf15Q8WU43 125 aaKnown RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 KCNE4Q8WWG9 221 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 IGSF8Q969P0 613 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 TRMT2BQ96GJ1 504 aaKnown RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 CNDP2Q96KP4 475 aaKnown RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 SENP8Q96LD8 212 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 MYRFLQ96LU7 910 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 ZNF578Q96N58 590 aaPredicted RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 POLD4Q9HCU8 107 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
PTPN20-223ENST00000509900 MAP4K5Q9Y4K4 846 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 RAD54BQ9Y620 910 aa10.3□□□□□ -0.76
PTPN20-223ENST00000509900 BLACEA4D250 179 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.29□□□□□ -0.76
PTPN20-223ENST00000509900 KCNJ18B7U540 433 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 NOL4O94818 638 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 MCF2P10911 925 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 ADH5P11766 374 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 ODC1P11926 461 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 XRCC6P12956 609 aaKnown RBP eCLIP10.29□□□□□ -0.76
PTPN20-223ENST00000509900 HDCP19113 662 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 PROZP22891 400 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 AFF3P51826 1226 aaKnown RBP10.29□□□□□ -0.76
PTPN20-223ENST00000509900 LILRA4P59901 499 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
PTPN20-223ENST00000509900 KCNB1Q14721 858 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 NECTIN1Q15223 517 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 ZBTB6Q15916 424 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 INAVAQ3KP66 663 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 LINC00303Q3SY05 128 aa10.29□□□□□ -0.76
PTPN20-223ENST00000509900 SEZ6Q53EL9 994 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms