RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 CEP250Q9BV73 2442 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 GREM1O60565 184 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 ACO1P21399 889 aaKnown RBP18.94■□□□□ 0.62
TPM3-220ENST00000509601 CNR2P34972 360 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 PXNP49023 591 aaPredicted RBP18.94■□□□□ 0.62
TPM3-220ENST00000509601 KIF11P52732 1056 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 TCERG1LQ5VWI1 586 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 WDR5BQ86VZ2 330 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 DDX42Q86XP3 938 aaKnown RBP eCLIP18.94■□□□□ 0.62
TPM3-220ENST00000509601 EXOC4Q96A65 974 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 TMEM176AQ96HP8 235 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 PNPLA8Q9NP80 782 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 NCDNQ9UBB6 729 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 ARMCX3Q9UH62 379 aaPredicted RBP18.94■□□□□ 0.62
TPM3-220ENST00000509601 USP3Q9Y6I4 520 aa18.94■□□□□ 0.62
TPM3-220ENST00000509601 A0A0A0MRY4 1105 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 TLR5O60602 858 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 TRIM21P19474 475 aaKnown RBP18.93■□□□□ 0.62
TPM3-220ENST00000509601 MESP2Q0VG99 397 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 MORC3Q14149 939 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 SIM2Q14190 667 aaPredicted RBP18.93■□□□□ 0.62
TPM3-220ENST00000509601 LPAL2Q16609 132 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 DCAF17Q5H9S7 520 aaPredicted RBP18.93■□□□□ 0.62
TPM3-220ENST00000509601 SCD5Q86SK9 330 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 TTC39CQ8N584 583 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 RPLP0P6Q8NHW5 317 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 JAKMIP2Q96AA8 810 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 KLF16Q9BXK1 252 aaPredicted RBP18.93■□□□□ 0.62
TPM3-220ENST00000509601 UBXN6Q9BZV1 441 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 FAM124BQ9H5Z6 455 aaPredicted RBP18.93■□□□□ 0.62
TPM3-220ENST00000509601 CYLDQ9NQC7 956 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 TLR8Q9NR97 1041 aaKnown RBP18.93■□□□□ 0.62
TPM3-220ENST00000509601 TBC1D14Q9P2M4 693 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 SLC8A2Q9UPR5 921 aa18.93■□□□□ 0.62
TPM3-220ENST00000509601 CCDC163A0A0D9SF12 145 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 PSMA7O14818 248 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 CYP26A1O43174 497 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 ID4P47928 161 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 LY6G5CQ5SRR4 150 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 ARHGAP17Q68EM7 881 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 TTI2Q6NXR4 508 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 PRR23BQ6ZRT6 265 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 SYT13Q7L8C5 426 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 C12orf40Q86WS4 652 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 BBS7Q8IWZ6 715 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 USP33Q8TEY7 942 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 CEP63Q96MT8 703 aa18.92■□□□□ 0.62
TPM3-220ENST00000509601 CIZ1Q9ULV3 898 aaPredicted RBP18.92■□□□□ 0.62
TPM3-220ENST00000509601 A0A1W2PQH9 124 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 PMM2O15305 246 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 CHRM1P11229 460 aaPredicted RBP18.91■□□□□ 0.62
TPM3-220ENST00000509601 STIM1Q13586 685 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 CUL2Q13617 745 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 LAIR1Q6GTX8 287 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 FOXR2Q6PJQ5 311 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 HTR3DQ70Z44 454 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 SFTPA1Q8IWL2 248 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 ZNF276Q8N554 614 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 CAMKK1Q8N5S9 505 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 UBR7Q8N806 425 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 RMDN1Q96DB5 314 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 OTUB2Q96DC9 234 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 METTL14Q9HCE5 456 aaKnown RBP18.91■□□□□ 0.62
TPM3-220ENST00000509601 PARD6AQ9NPB6 346 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.91■□□□□ 0.62
TPM3-220ENST00000509601 NUDT5Q9UKK9 219 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 SH3BP1Q9Y3L3 701 aa18.91■□□□□ 0.62
TPM3-220ENST00000509601 BIN1O00499 593 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 RETP07949 1114 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 RARGP13631 454 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 ATP5C1P36542 298 aaKnown RBP18.9■□□□□ 0.62
TPM3-220ENST00000509601 PPP1R2P41236 205 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 FMO5P49326 533 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 LRMPQ12912 555 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 KLHL10Q6JEL2 608 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 KLHDC10Q6PID8 442 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 CCDC186Q7Z3E2 898 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 TMEM25Q86YD3 366 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 PHTF2Q8N3S3 785 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 ANKRD52Q8NB46 1076 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 LMO3Q8TAP4 145 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 NELFBQ8WX92 580 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 SECISBP2LQ93073 1101 aaKnown RBP18.9■□□□□ 0.62
TPM3-220ENST00000509601 PNKPQ96T60 521 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 DNAI2Q9GZS0 605 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 RAB23Q9ULC3 237 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 MYO16Q9Y6X6 1858 aa18.9■□□□□ 0.62
TPM3-220ENST00000509601 MDM4O15151 490 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 ADH1CP00326 375 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 IRF1P10914 325 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 ADH5P11766 374 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 EIF2DP41214 584 aaKnown RBP18.89■□□□□ 0.61
TPM3-220ENST00000509601 GAD2Q05329 585 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 DMC1Q14565 340 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 C2orf27AQ580R0 203 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 RAB41Q5JT25 222 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 EMC10Q5UCC4 262 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 PIGZQ86VD9 579 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 TTC30AQ86WT1 665 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 ETFBKMTQ8IXQ9 262 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms