RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 TPTEP56180 551 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 SOX8P57073 446 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 GPSM2P81274 684 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 BTKQ06187 659 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 MYO1EQ12965 1108 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 PDE1CQ14123 709 aaPredicted RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 E2F2Q14209 437 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 GBX1Q14549 363 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZIK1Q3SY52 487 aaPredicted RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 ARHGAP29Q52LW3 1261 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 COBLL1Q53SF7 1204 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 TMEM240Q5SV17 173 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZNF813Q6ZN06 617 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 SRGAP1Q7Z6B7 1085 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 CATIPQ7Z7H3 387 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 PIP4P1Q86T03 277 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 MORC1Q86VD1 984 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 CELF5Q8N6W0 485 aaKnown RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 C16orf52Q8NHV5 167 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 BRIX1Q8TDN6 353 aaKnown RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 SNRNP27Q8WVK2 155 aaKnown RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 XAGE5Q8WWM1 108 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 GJA10Q969M2 543 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 SLC39A13Q96H72 371 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 STRBPQ96SI9 672 aaKnown RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 FAM118BQ9BPY3 351 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 MESP1Q9BRJ9 268 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 RTFDC1Q9BY42 306 aaPredicted RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 CXorf36Q9H7Y0 433 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 FAM204AQ9H8W3 233 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 NMRK2Q9NPI5 230 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 C1orf112Q9NSG2 853 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 ASIC5Q9NY37 505 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 TAGLN3Q9UI15 199 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 MRPS17Q9Y2R5 130 aaKnown RBP2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 DAAM1Q9Y4D1 1078 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 PLEKHM1Q9Y4G2 1056 aa2.84□□□□□ -1.95
DEPDC1B-204ENST00000509006 hCG_1642624A0A1W2PR95 340 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 ADAM10O14672 748 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 ANP32CO43423 234 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 EXOC3O60645 756 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 IL33O95760 270 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 GRPP07492 148 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 PF4V1P10720 104 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 PRF1P14222 555 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 MCCP23508 829 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 ADORA2AP29274 412 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 PDE6CP51160 858 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 AK2P54819 239 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 POU5F1Q01860 360 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 SRSF1Q07955 248 aaKnown RBP eCLIP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 HYAL1Q12794 435 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 ERV3-1Q14264 604 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 TRIM71Q2Q1W2 868 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 PGS1Q32NB8 556 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 TBC1D25Q3MII6 688 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 CERKLQ49MI3 558 aaPredicted RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 C10orf25Q5T742 122 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 IL31Q6EBC2 164 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 C1orf228Q6PIY5 440 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 MMS22LQ6ZRQ5 1243 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 TOGARAM2Q6ZUX3 1019 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 BCDIN3DQ7Z5W3 292 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 MRPL10Q7Z7H8 261 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 ZNF280BQ86YH2 543 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM186BQ8IYM0 893 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 PCSK9Q8NBP7 692 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 IGFBPL1Q8WX77 278 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 SLC35A4Q96G79 324 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 CDK5RAP3Q96JB5 506 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 MYD88Q99836 296 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 RHOBTB2Q9BYZ6 727 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 GTPBP4Q9BZE4 634 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 CIPCQ9C0C6 399 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 PLCB1Q9NQ66 1216 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 MAP3K20Q9NYL2 800 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 MDFICQ9P1T7 246 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 XPR1Q9UBH6 696 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 SHOC2Q9UQ13 582 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 MED16Q9Y2X0 877 aa2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 FRMPD2Q68DX3 1309 aaPredicted RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 TCF20Q9UGU0 1960 aaKnown RBP2.83□□□□□ -1.96
DEPDC1B-204ENST00000509006 EVPLQ92817 2033 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 A0A0U1RQG5 324 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 CD8B2A6NJW9 211 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 UBE2Q2LH0YL09 131 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 GTPBP1O00178 669 aaKnown RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 TIMM44O43615 452 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 VNN1O95497 513 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 A1BGP04217 495 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 PRKCBP05771 671 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 DLDP09622 509 aaKnown RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 SETSIPP0DME0 302 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 MYCLP12524 364 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 HOXD9P28356 352 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 LRPAP1P30533 357 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 THBS4P35443 961 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 COPB2P35606 906 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms