RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 CCDC195A0A1B0GUA6 201 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CCDC169A6NNP5 214 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 C22orf46C9J442 243 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 H3BQV1 296 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 PRRG1O14668 218 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 INPPL1O15357 1258 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 USO1O60763 962 aaKnown RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ZNF623O75123 536 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 PSMD10O75832 226 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 NPTXRO95502 500 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ASMTLO95671 621 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 LRG1P02750 347 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 SOD2P04179 222 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 NTRK1P04629 796 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MPOP05164 745 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 KRT18P05783 430 aaKnown RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 THP07101 528 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 GALTP07902 379 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 DBHP09172 617 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CYP3A7P24462 503 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MLH1P40692 756 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CLCN5P51795 746 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 NEK4P51957 841 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 EFNA5P52803 228 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ANAPC15P60006 121 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ERVFRD-1P60508 538 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 PFKPQ01813 784 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 STRN3Q13033 797 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 PPP2R5CQ13362 524 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 LSAMPQ13449 338 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CTTNQ14247 550 aaKnown RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 TESK1Q15569 626 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ZRSR1Q15695 479 aaKnown RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 TAF12Q16514 161 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MAPK6Q16659 721 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 SPECC1Q5M775 1068 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 RSPO2Q6UXX9 243 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 C15orf39Q6ZRI6 1047 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MTSS1LQ765P7 747 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 GET4Q7L5D6 327 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MAEAQ7L5Y9 396 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MTDHQ86UE4 582 aaKnown RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 FERMT3Q86UX7 667 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 PALB2Q86YC2 1186 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 IRF2BP1Q8IU81 584 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 C4orf19Q8IY42 314 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 YAF2Q8IY57 180 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ZDHHC14Q8IZN3 488 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 FBXL16Q8N461 479 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 VN1R2Q8NFZ6 395 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 RIN2Q8WYP3 895 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 PTPRN2Q92932 1015 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 EXOC4Q96A65 974 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 BICD1Q96G01 975 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 DYDC2Q96IM9 177 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 C8orf76Q96K31 380 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CCDC94Q9BW85 323 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CSRNP2Q9H175 543 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 EPB41L4BQ9H329 900 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 SEMA4AQ9H3S1 761 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CWH43Q9H720 699 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 TTC12Q9H892 705 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 KCNK12Q9HB15 430 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MAN1C1Q9NR34 630 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ANKEF1Q9NU02 776 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 SLC38A7Q9NVC3 462 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 FANCLQ9NW38 375 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 FAM53CQ9NYF3 392 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 PPARGC1AQ9UBK2 798 aaKnown RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 SFMBT1Q9UHJ3 866 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 COA3Q9Y2R0 106 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 MRPS17Q9Y2R5 130 aaKnown RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 GIT1Q9Y2X7 761 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 ZFP37Q9Y6Q3 630 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 STK36Q9NRP7 1315 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 CHD9Q3L8U1 2897 aa4.12□□□□□ -1.75
HMGN1P11-201ENST00000508668 DOCK5Q9H7D0 1870 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 TRANK1O15050 2925 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 CCDC163A0A0D9SF12 145 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 ZC3H12DA2A288 527 aaKnown RBP4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 ARL5CA6NH57 179 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 C2CD4DB7Z1M9 353 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 H0YCG3 227 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 H7C4K7 107 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 K7ERI5 159 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 NRP1O14786 923 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 PPP1R12AO14974 1030 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 LAMTOR5O43504 91 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 XPOTO43592 962 aaKnown RBP4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 OFD1O75665 1012 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 CLSTN1O94985 981 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 GLP2RO95838 553 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 CENPBP07199 599 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 WEE2P0C1S8 567 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 GLI4P10075 376 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 MYBP10242 640 aa4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 XRCC6P12956 609 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGN1P11-201ENST00000508668 EPCAMP16422 314 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms