RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 SPDYAQ5MJ70 313 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 ANKS6Q68DC2 871 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 SNRNP48Q6IEG0 339 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 FAM180AQ6UWF9 173 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 Q6ZRM9 215 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 ZNF589Q86UQ0 364 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 GSPT2Q8IYD1 628 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 CPXCR1Q8N123 301 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 PQLC1Q8N2U9 271 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 OR2I1PQ8NGU4 316 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 ATXN2LQ8WWM7 1075 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 RAB24Q969Q5 203 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 RILPL2Q969X0 211 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 GDF15Q99988 308 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 CPPED1Q9BRF8 314 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 TEX13BQ9BXU2 312 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC38A10Q9HBR0 1119 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 RAVER2Q9HCJ3 691 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 TRPS1Q9UHF7 1281 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 NRBP1Q9UHY1 535 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 FEM1BQ9UK73 627 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 DOCK3Q8IZD9 2030 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 PARP14Q460N5 1801 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 KIAA0100Q14667 2235 aaKnown RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 ZMYM6O95789 1325 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CCDC171Q6TFL3 1326 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 A0A1W2PPC1 479 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 TMEM232C9JQI7 657 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 MATN3O15232 486 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 SNAI1O95863 264 aaPredicted RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 PDGFRBP09619 1106 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC1A4P43007 532 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 GDF5P43026 501 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 SCNN1GP51170 649 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 HAND2P61296 217 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 NRN1LQ496H8 165 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 USP39Q53GS9 565 aaKnown RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 AKNAD1Q5T1N1 836 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 GJC2Q5T442 439 aaPredicted RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 TTC22Q5TAA0 569 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 ANO1Q5XXA6 986 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 MFSD5Q6N075 450 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CWC27Q6UX04 472 aaKnown RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 RASGRP2Q7LDG7 609 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 SPRED1Q7Z699 444 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 ZBTB46Q86UZ6 589 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 FAM160B2Q86V87 743 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 ANKRD35Q8N283 1001 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 OR7D4Q8NG98 312 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CCHCR1Q8TD31 782 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CHURC1Q8WUH1 139 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 ST8SIA2Q92186 375 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 EDAQ92838 391 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 EXTL1Q92935 676 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 MIEF2Q96C03 454 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CHMP4CQ96CF2 233 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CCDC136Q96JN2 1154 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CEP89Q96ST8 783 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CDK5RAP1Q96SZ6 601 aaKnown RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 LSM14BQ9BX40 385 aaKnown RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 SENP6Q9GZR1 1112 aaPredicted RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 AASDHPPTQ9NRN7 309 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 TCP11L1Q9NUJ3 509 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 FBXO40Q9UH90 709 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 ZMYND8Q9ULU4 1186 aaPredicted RBP4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 STX8Q9UNK0 236 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 CNPY2Q9Y2B0 182 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 GIT1Q9Y2X7 761 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 MYH8P13535 1937 aa4.05□□□□□ -1.76
UBE2D3-226ENST00000508635 HIP1O00291 1037 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 CYR61O00622 381 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 ZNF213O14771 459 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 IPO13O94829 963 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 SNUPNO95149 360 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 PGK1P00558 417 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 GASTP01350 101 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 RARBP10826 455 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 TOP1P11387 765 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 PCP11498 1178 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 AKR1A1P14550 325 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 CHMLP26374 656 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 CRHR1P34998 444 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 SREBF1P36956 1147 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 NEK2P51955 445 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 STAT2P52630 851 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 SNAP25P60880 206 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 MGAT2Q10469 447 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 LRRC41Q15345 812 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 UAP1L1Q3KQV9 507 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 RRP12Q5JTH9 1297 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 CCDC174Q6PII3 467 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC39A5Q6ZMH5 540 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 MFSD6Q6ZSS7 791 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 PDZD4Q76G19 769 aaPredicted RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 DGKHQ86XP1 1220 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 TBC1D10CQ8IV04 446 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 RHOT1Q8IXI2 618 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 FAM133AQ8N9E0 248 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC35B2Q8TB61 432 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 HOXB13Q92826 284 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms