RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 C8orf48Q96LL4 319 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 HSPA12BQ96MM6 686 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 ZDHHC5Q9C0B5 715 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 ZDHHC4Q9NPG8 344 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 SMPD4Q9NXE4 827 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 RBAKQ9NYW8 714 aaPredicted RBP10.01□□□□□ -0.81
NEDD9-211ENST00000508546 KIAA1522Q9P206 1035 aaPredicted RBP10.01□□□□□ -0.81
NEDD9-211ENST00000508546 DEC1Q9P2X7 70 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 SEL1LQ9UBV2 794 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 SUSD2Q9UGT4 822 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 KIF3AQ9Y496 699 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 COL12A1Q99715 3063 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 CKAP5Q14008 2032 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 TMEM131Q92545 1883 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 F8VP50 259 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 SCAMP3O14828 347 aaKnown RBP10□□□□□ -0.81
NEDD9-211ENST00000508546 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
NEDD9-211ENST00000508546 CBFA2T3O75081 653 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 TULP3O75386 442 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 KRT19P08727 400 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 TMEM191BP0C7N4 346 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 MBL2P11226 248 aaPredicted RBP10□□□□□ -0.81
NEDD9-211ENST00000508546 HOXB2P14652 356 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 WARSP23381 471 aaKnown RBP10□□□□□ -0.81
NEDD9-211ENST00000508546 DDIT3P35638 169 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 PSMC1P62191 440 aaKnown RBP10□□□□□ -0.81
NEDD9-211ENST00000508546 CYP27A1Q02318 531 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 KCNA1Q09470 495 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 TAF10Q12962 218 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 MYO1EQ12965 1108 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 PLEKHG6Q3KR16 790 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 SYCP2LQ5T4T6 812 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 TDRD10Q5VZ19 366 aaKnown RBP10□□□□□ -0.81
NEDD9-211ENST00000508546 BTBD8Q5XKL5 378 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 MCTP1Q6DN14 999 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 PCSK4Q6UW60 755 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 TOGARAM2Q6ZUX3 1019 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 SFR1Q86XK3 245 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 MARCH9Q86YJ5 346 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 TRIML1Q8N9V2 468 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 ZSWIM2Q8NEG5 633 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 SAAL1Q96ER3 474 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 PCED1BQ96HM7 432 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 ZFRQ96KR1 1074 aaKnown RBP10□□□□□ -0.81
NEDD9-211ENST00000508546 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 SLITRK1Q96PX8 696 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 MTMR12Q9C0I1 747 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 PRORYQ9H606 182 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 HCN2Q9UL51 889 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 MGAQ8IWI9 3026 aa10□□□□□ -0.81
NEDD9-211ENST00000508546 DOPEY2Q9Y3R5 2298 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 ANKRD17O75179 2603 aaKnown RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 ABL1P00519 1130 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 ZNF883P0CG24 379 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 GNSP15586 552 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 NDUFV2P19404 249 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 ITPKBP27987 946 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 LONP1P36776 959 aaKnown RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 C10orf76Q5T2E6 689 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 L1TD1Q5T7N2 865 aaKnown RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 SLCO6A1Q86UG4 719 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 MIB1Q86YT6 1006 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 RGL4Q8IZJ4 473 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 NAT16Q8N8M0 369 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 PDZD8Q8NEN9 1154 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 IPO4Q8TEX9 1081 aaKnown RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 OVCA2Q8WZ82 227 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 ANKRD36BP1Q96IX9 119 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 ACCSQ96QU6 501 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 GABRG3Q99928 467 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 MRPL44Q9H9J2 332 aaKnown RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 PDE11AQ9HCR9 933 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 SPHK2Q9NRA0 654 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 INTS13Q9NVM9 706 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 PCOLCE2Q9UKZ9 415 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 R3HCC1Q9Y3T6 440 aaKnown RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 NFE2L3Q9Y4A8 694 aa9.99□□□□□ -0.81
NEDD9-211ENST00000508546 SPTAN1Q13813 2472 aaKnown RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 TP53BP1Q12888 1972 aaPredicted RBP9.99□□□□□ -0.81
NEDD9-211ENST00000508546 NUMA1Q14980 2115 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 KIAA0391O15091 583 aaKnown RBP9.98□□□□□ -0.81
NEDD9-211ENST00000508546 COCHO43405 550 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 NDUFS2O75306 463 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 DKK1O94907 266 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 BMP15O95972 392 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 PDGFRBP09619 1106 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 FAM163BP0C2L3 166 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 GAP43P17677 238 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 TUBP50607 506 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 CFHR1Q03591 330 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 CYP4F3Q08477 520 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 GRIK2Q13002 908 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 ALCAMQ13740 583 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 MDH1BQ5I0G3 518 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 WDR45BQ5MNZ6 344 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms