RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 C6orf132Q5T0Z8 1188 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 ATL3Q6DD88 541 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 ESRP1Q6NXG1 681 aaKnown RBP3.08□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC62Q6P9F0 684 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 MAMDC4Q6UXC1 1216 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 TOGARAM2Q6ZUX3 1019 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF438Q7Z4V0 828 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 DENND1CQ8IV53 801 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 C12orf76Q8N812 135 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-208ENST00000508342 OXER1Q8TDS5 423 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC124Q96CT7 223 aaKnown RBP3.08□□□□□ -1.92
NEDD4-208ENST00000508342 OTUB1Q96FW1 271 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-208ENST00000508342 VMP1Q96GC9 406 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 CINPQ9BW66 212 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-208ENST00000508342 SPATA16Q9BXB7 569 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 VCX3BQ9H321 246 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 VPS37BQ9H9H4 285 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 VCX3AQ9NNX9 186 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 GPSM3Q9Y4H4 160 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 CDY1Q9Y6F8 540 aa3.08□□□□□ -1.92
NEDD4-208ENST00000508342 GOLGA8QA0A0J9YX86 632 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGAP10A1A4S6 786 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GOLGA8OA6NCC3 632 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 C1QTNF3-AMACRE9PGA6 284 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GOLGA8NF8WBI6 632 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KIAA0391O15091 583 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CER1O95813 267 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CXCL8P10145 99 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ADH5P11766 374 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NCAM1P13591 858 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PCSK2P16519 638 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PSMA4P25789 261 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 U2AF2P26368 475 aaKnown RBP eCLIP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PBLDP30039 288 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GUCY1A2P33402 732 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NUMBP49757 651 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ASPHQ12797 758 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ARID5BQ14865 1188 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZSCAN23Q3MJ62 389 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CHMP1BQ7LBR1 199 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PATL1Q86TB9 770 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC60Q8IWA6 550 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PDZD8Q8NEN9 1154 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TRPV1Q8NER1 839 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CYP2W1Q8TAV3 490 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PIGKQ92643 395 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SLC5A5Q92911 643 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 IRF7Q92985 503 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CAPZA3Q96KX2 299 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CLIC6Q96NY7 704 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 DRC3Q9H069 523 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 UPF3AQ9H1J1 476 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SARS2Q9NP81 518 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GPRC5CQ9NQ84 441 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RPRD1BQ9NQG5 326 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NDFIP2Q9NV92 336 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 HSPBP1Q9NZL4 362 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KCND2Q9NZV8 630 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CFAP97Q9P2B7 532 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 POLG2Q9UHN1 485 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 STAP1Q9ULZ2 295 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PDCD11Q14690 1871 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3DA0A087WVF3 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3IA0A087WXS9 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3EA0A087X179 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3KA0A087X1G2 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 LCHNA4D1U4 455 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3FA6NER0 549 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3LB9A6J9 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SMAPO00193 183 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 LINC01565O15544 149 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF862O60290 1169 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MAFO75444 373 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3HP0C7X1 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC130P13994 396 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NR2F2P24468 414 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 OXTRP30559 389 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 HOXC8P31273 242 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PAPOLAP51003 745 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CLNS1AP54105 237 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 IL9RQ01113 521 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 LMAN2Q12907 356 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZBTB17Q13105 803 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MORC3Q14149 939 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ANKRD20A3Q5VUR7 823 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3GQ6DHY5 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3CQ6IPX1 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SERPINA13PQ6UXR4 307 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RABEPKQ7Z6M1 372 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TMTC1Q8IUR5 882 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D3Q8IZP1 549 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ADSSL1Q8N142 457 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 LEMD2Q8NC56 503 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RSPH1Q8WYR4 309 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KAZALD1Q96I82 304 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MTMR9Q96QG7 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 BBS2Q9BXC9 721 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZDHHC6Q9H6R6 413 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 WDR35Q9P2L0 1181 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SEL1LQ9UBV2 794 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms