RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 PPM1LQ5SGD2 360 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 UBAP2Q5T6F2 1119 aaKnown RBP11.54□□□□□ -0.56
PROM1-207ENST00000508167 CYP4A22Q5TCH4 519 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 TTC27Q6P3X3 843 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 LCLAT1Q6UWP7 414 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 SLC7A14Q8TBB6 771 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 HNRNPABQ99729 332 aaKnown RBP11.54□□□□□ -0.56
PROM1-207ENST00000508167 CLSTN3Q9BQT9 956 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 TRIM7Q9C029 511 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 ZCWPW1Q9H0M4 648 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 ZDHHC18Q9NUE0 388 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 TMLHEQ9NVH6 421 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 LZTS1Q9Y250 596 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 SHOX2O60902 331 aaPredicted RBP11.54□□□□□ -0.56
PROM1-207ENST00000508167 RTN2O75298 545 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 CTNNA2P26232 953 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 KIAA0319Q5VV43 1072 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 PIGZQ86VD9 579 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 KREMEN2Q8NCW0 462 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 KRT12Q99456 494 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 APOL5Q9BWW9 433 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 DUSP16Q9BY84 665 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 AFF4Q9UHB7 1163 aaKnown RBP11.54□□□□□ -0.56
PROM1-207ENST00000508167 WDR27A2RRH5 827 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 MTMR11A4FU01 709 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 RPS6KA1Q15418 735 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 CLEC16AQ2KHT3 1053 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 DNAJC24Q6P3W2 148 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 CCDC149Q6ZUS6 474 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 MON1BQ7L1V2 547 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 ZNF512Q96ME7 567 aaPredicted RBP11.54□□□□□ -0.56
PROM1-207ENST00000508167 RTP3Q9BQQ7 232 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 SLITRK6Q9H5Y7 841 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 DPP7Q9UHL4 492 aa11.54□□□□□ -0.56
PROM1-207ENST00000508167 CTNNA1P35221 906 aaKnown RBP11.53□□□□□ -0.56
PROM1-207ENST00000508167 TKTL1P51854 596 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 STKLD1Q8NE28 680 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 BTBD6Q96KE9 485 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 KLHL5Q96PQ7 755 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 CNOT8Q9UFF9 292 aaKnown RBP11.53□□□□□ -0.56
PROM1-207ENST00000508167 ADIGQ0VDE8 80 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 ODF2Q5BJF6 829 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 FAM102AQ5T9C2 384 aaPredicted RBP11.53□□□□□ -0.56
PROM1-207ENST00000508167 EMC10Q5UCC4 262 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 TPGS2Q68CL5 300 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 ARHGAP17Q68EM7 881 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 RSPO2Q6UXX9 243 aaPredicted RBP11.53□□□□□ -0.56
PROM1-207ENST00000508167 AP1M1Q9BXS5 423 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 CARD9Q9H257 536 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 ALG6Q9Y672 507 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 SYNJ2BP-COX16A0A087WUM0 186 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 C2orf71A6NGG8 1288 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 TRIM66O15016 1216 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 GRAP2O75791 330 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 HEXIM1O94992 359 aaKnown RBP11.53□□□□□ -0.56
PROM1-207ENST00000508167 LSM8O95777 96 aaKnown RBP11.53□□□□□ -0.56
PROM1-207ENST00000508167 CALB1P05937 261 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 C8AP07357 584 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 SRGAP2BP0DMP2 458 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 CYP1B1Q16678 543 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 ACAD10Q6JQN1 1059 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 VSTM1Q6UX27 236 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 ZDHHC24Q6UX98 284 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 TTC30AQ86WT1 665 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 SCUBE3Q8IX30 993 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 COX16Q9P0S2 106 aa11.53□□□□□ -0.56
PROM1-207ENST00000508167 ACADSBP45954 432 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 PDE12Q6L8Q7 609 aaKnown RBP11.52□□□□□ -0.56
PROM1-207ENST00000508167 DENND5BQ6ZUT9 1274 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 DAAM2Q86T65 1068 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 TTC9BQ8N6N2 239 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 FAM71BQ8TC56 605 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 TRIM11Q96F44 468 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 FUBP3Q96I24 572 aaKnown RBP eCLIP11.52□□□□□ -0.56
PROM1-207ENST00000508167 SLITRK1Q96PX8 696 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 GCNAQ96QF7 691 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 STRIP2Q9ULQ0 834 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 NFU1Q9UMS0 254 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 NME7Q9Y5B8 376 aa11.52□□□□□ -0.56
PROM1-207ENST00000508167 E5RJQ4 531 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 ERLIN1O75477 346 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 ATF2P15336 505 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 HSPA9P38646 679 aaKnown RBP11.52□□□□□ -0.57
PROM1-207ENST00000508167 GPR15P49685 360 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 CENPCQ03188 943 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 ZNF252P-AS1Q0IIN9 211 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 TWF1Q12792 350 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 PDCLQ13371 301 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 RAB33AQ14088 237 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 SLC8B1Q6J4K2 584 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 PRELID2Q8N945 189 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 FBXO32Q969P5 355 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 NEU2Q9Y3R4 380 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 TULP2O00295 520 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 POLR3GO15318 223 aaPredicted RBP11.52□□□□□ -0.57
PROM1-207ENST00000508167 SART1O43290 800 aaKnown RBP11.52□□□□□ -0.57
PROM1-207ENST00000508167 TGM5O43548 720 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms