RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CCNE2O96020 404 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 UBA1P22314 1058 aaKnown RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CCNE1P24864 410 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 GRK2P25098 689 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 PSMA3P25788 255 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 LRRC63Q05C16 580 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 GIT2Q14161 759 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 TAF5Q15542 800 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 NFIL3Q16649 462 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 BMT2Q1RMZ1 405 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CT83Q5H943 113 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 RINT1Q6NUQ1 792 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 FIP1L1Q6UN15 594 aaKnown RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 KCNK18Q7Z418 384 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 RAET1EQ8TD07 263 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 LRRC15Q8TF66 581 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 TMEM174Q8WUU8 243 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CTAGE1Q96RT6 745 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 ZNF302Q9NR11 478 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 SAMSN1Q9NSI8 373 aaKnown RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 KCTD5Q9NXV2 234 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 IFT80Q9P2H3 777 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 HCSTQ9UBK5 93 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 STARD13Q9Y3M8 1113 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 COL1A2P08123 1366 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 A0A087WV62 115 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 SHISA3A0PJX4 238 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CHMP2AO43633 222 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 DGAT1O75907 488 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CST3P01034 146 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 AGXTP21549 392 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 YWHABP31946 246 aaKnown RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 COASYQ13057 564 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CTTNQ14247 550 aaKnown RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 HSP90AA4PQ58FG1 418 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 FAM26FQ5R3K3 315 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 E4F1Q66K89 784 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 TAPT1Q6NXT6 567 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 SEPT14Q6ZU15 432 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CCDC112Q8NEF3 446 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 MCPH1Q8NEM0 835 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 ANKRD20A12PQ8NF67 263 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 KIFAP3Q92845 792 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 CCDC43Q96MW1 224 aaKnown RBP7.57□□□□□ -1.2
CLCN3-206ENST00000507875 TSG101Q99816 390 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 KATNBL1Q9H079 304 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 BLZF1Q9H2G9 400 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 THAP9Q9H5L6 903 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 MLXIPQ9HAP2 919 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 RGL1Q9NZL6 768 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 GRHPRQ9UBQ7 328 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 SRRDQ9UH36 339 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 L1RE1Q9UN81 338 aa7.57□□□□□ -1.2
CLCN3-206ENST00000507875 RRN3P2A6NIE6 340 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TOR1BO14657 336 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 PGK2P07205 417 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TXNP10599 105 aaKnown RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 CAPN3P20807 821 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 RXRGP48443 463 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 RARRES1P49788 294 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 GALNT1Q10472 559 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 FAM209BQ5JX69 171 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 CENPPQ6IPU0 288 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 PLBD1Q6P4A8 553 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 SRGAP1Q7Z6B7 1085 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TBC1D1Q86TI0 1168 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 FAM26EQ8N5C1 309 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 GOLGA5Q8TBA6 731 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 ZNF507Q8TCN5 953 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 STAMQ92783 540 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 MVB12AQ96EY5 273 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TRIM47Q96LD4 638 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 PLIN2Q99541 437 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 JAM3Q9BX67 310 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 SMARCAD1Q9H4L7 1026 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 AZI2Q9H6S1 392 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 ZMAT4Q9H898 229 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 PLEKHA5Q9HAU0 1116 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 LARSQ9P2J5 1176 aaKnown RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 GSTTP1A0A1W2PQM5 241 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 RTCAO00442 366 aaKnown RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TNPO2O14787 897 aaKnown RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 NCAM2O15394 837 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 PRAMEF1O95521 474 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 GGPS1O95749 300 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 GNA14O95837 355 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 ALBP02768 609 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 IDEP14735 1019 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 SH3BGRP55822 239 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 OCRLQ01968 901 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 CYP4A11Q02928 519 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TBX2Q13207 712 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 NR1I3Q14994 352 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 EDRF1Q3B7T1 1238 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 DUSP28Q4G0W2 176 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 CCDC38Q502W7 563 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 SPECC1LQ69YQ0 1117 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TLDC1Q6P9B6 456 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 TMEM151BQ8IW70 566 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms