RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 KREMEN1Q96MU8 473 aa14.9□□□□□ -0.02
CCHCR1-222ENST00000507459 SH3BP1Q9Y3L3 701 aa14.9□□□□□ -0.02
CCHCR1-222ENST00000507459 MYO16Q9Y6X6 1858 aa14.9□□□□□ -0.02
CCHCR1-222ENST00000507459 HELZP42694 1942 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-222ENST00000507459 O00370 1275 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 PES1O00541 588 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 MDM4O15151 490 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 NFATC1O95644 943 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 PAEPP09466 180 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 BRD2P25440 801 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 ATP5C1P36542 298 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 GALK1P51570 392 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 TKTL1P51854 596 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 APBA1Q02410 837 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 CSTF1Q05048 431 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 BST2Q10589 180 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 MAN2A1Q16706 1144 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 EXOC3L4Q17RC7 722 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 C10orf120Q5SQS8 335 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 NAIF1Q69YI7 327 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 TSSK4Q6SA08 328 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 SASS6Q6UVJ0 657 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 GBP6Q6ZN66 633 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 CCDC186Q7Z3E2 898 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 MAML2Q8IZL2 1156 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 CHFRQ96EP1 664 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 ZFRQ96KR1 1074 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 UBXN6Q9BZV1 441 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 CHRDQ9H2X0 955 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 LRRC4Q9HBW1 653 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 SAMSN1Q9NSI8 373 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 USP3Q9Y6I4 520 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 PATJQ8NI35 1801 aa14.89□□□□□ -0.03
CCHCR1-222ENST00000507459 SLC9A3R1O14745 358 aaPredicted RBP14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 XPO1O14980 1071 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 MBD3O95983 291 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 SP9P0CG40 484 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 RALAP11233 206 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 USP8P40818 1118 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 MRE11P49959 708 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 GRSF1Q12849 480 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 ARHGAP44Q17R89 818 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 DGKKQ5KSL6 1271 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 TRIM65Q6PJ69 517 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 LCLAT1Q6UWP7 414 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 Q6ZS52 159 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 RBM43Q6ZSC3 357 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 SCD5Q86SK9 330 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 ADGRG2Q8IZP9 1017 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 NDRG1Q92597 394 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 WBP2Q969T9 261 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 P2RY13Q9BPV8 354 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 ZSWIM1Q9BR11 485 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 TUBGCP2Q9BSJ2 902 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 ULBP1Q9BZM6 244 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 FBRSL1Q9HCM7 1045 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 CYLDQ9NQC7 956 aa14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCHCR1-222ENST00000507459 E2F8A0AVK6 867 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 KCNJ18B7U540 433 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 M0QYV0 167 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 PIK3R2O00459 728 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 TRDMT1O14717 391 aaKnown RBP14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 SETSIPP0DME0 302 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 LCP1P13796 627 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 PON1P27169 355 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 PSEN1P49768 467 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 RGS7P49802 495 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 ZNF132P52740 706 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 MFAP3P55082 362 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 ADIGQ0VDE8 80 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 CCINQ13939 588 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 GAS6Q14393 721 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 KCNJ12Q14500 433 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 DHCR24Q15392 516 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 CNGA2Q16280 664 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 VWA3BQ502W6 1294 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 TMEM196Q5HYL7 178 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 CT47A1Q5JQC4 288 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 RAB41Q5JT25 222 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 FSTL4Q6MZW2 842 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 MIB1Q86YT6 1006 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 CD101Q93033 1021 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 SECISBP2LQ93073 1101 aaKnown RBP14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 KLF16Q9BXK1 252 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 NDST4Q9H3R1 872 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 TBC1D14Q9P2M4 693 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 DNMT3LQ9UJW3 386 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 NFE2L3Q9Y4A8 694 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 R4GN57 208 aa14.87□□□□□ -0.03
CCHCR1-222ENST00000507459 ZBED1O96006 694 aa14.86□□□□□ -0.03
CCHCR1-222ENST00000507459 EGFP01133 1207 aa14.86□□□□□ -0.03
CCHCR1-222ENST00000507459 CYP17A1P05093 508 aa14.86□□□□□ -0.03
CCHCR1-222ENST00000507459 NBL1P41271 181 aa14.86□□□□□ -0.03
CCHCR1-222ENST00000507459 PLA2G4AP47712 749 aa14.86□□□□□ -0.03
CCHCR1-222ENST00000507459 YWHAGP61981 247 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCHCR1-222ENST00000507459 GOLGA8FQ08AF8 430 aa14.86□□□□□ -0.03
CCHCR1-222ENST00000507459 GOLGA8DPQ0D2H9 430 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms