RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 GMIPQ9P107 970 aa10.23□□□□□ -0.77
SFXN1-205ENST00000506963 ARHGAP26Q9UNA1 814 aa10.23□□□□□ -0.77
SFXN1-205ENST00000506963 LUC7L2Q9Y383 392 aaKnown RBP10.23□□□□□ -0.77
SFXN1-205ENST00000506963 BZW2Q9Y6E2 419 aaKnown RBP10.23□□□□□ -0.77
SFXN1-205ENST00000506963 XIRP2A4UGR9 3374 aa10.23□□□□□ -0.77
SFXN1-205ENST00000506963 C2orf78A6NCI8 922 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 PAPSS1O43252 624 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-205ENST00000506963 MMEP08473 750 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 USP17L7P0C7H9 530 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 UNGP13051 313 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-205ENST00000506963 HDCP19113 662 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 CASP14P31944 242 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 SCNN1AP37088 669 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 GABRB2P47870 512 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 PGFP49763 221 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 RGS7P49802 495 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 ASIC2Q16515 512 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 PTPN20Q4JDL3 420 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 HECTD3Q5T447 861 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 HGSNATQ68CP4 663 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 PPP1R2P3Q6NXS1 205 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 PARM1Q6UWI2 310 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 ZDHHC17Q8IUH5 632 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 ARID3BQ8IVW6 561 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-205ENST00000506963 CELF5Q8N6W0 485 aaKnown RBP10.22□□□□□ -0.77
SFXN1-205ENST00000506963 MAB21L3Q8N8X9 362 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 C1orf131Q8NDD1 294 aaKnown RBP10.22□□□□□ -0.77
SFXN1-205ENST00000506963 SLC20A1Q8WUM9 679 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 FGF14Q92915 247 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 PPP1R13BQ96KQ4 1090 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 CPXM1Q96SM3 734 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 CDK5RAP1Q96SZ6 601 aaKnown RBP10.22□□□□□ -0.77
SFXN1-205ENST00000506963 DNAJC7Q99615 494 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 AGPAT1Q99943 283 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 MIS12Q9H081 205 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 NMUR1Q9HB89 426 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 TDP1Q9NUW8 608 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 OSER1Q9NX31 292 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 LIMD1Q9UGP4 676 aa10.22□□□□□ -0.77
SFXN1-205ENST00000506963 CHORDC1Q9UHD1 332 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-205ENST00000506963 A0A1W2PQH9 124 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 YJEFN3A6XGL0 299 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 E5RJQ4 531 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 E7ENQ6 273 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 COCHO43405 550 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 TLR5O60602 858 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 PRAMEF12O95522 483 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 GLI1P08151 1106 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 MMP8P22894 467 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 SP100P23497 879 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 SSTR3P32745 418 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 AVPR1AP37288 418 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 GSCP56915 257 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 YWHAGP61981 247 aaKnown RBP eCLIP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 CENPCQ03188 943 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 FCHO2Q0JRZ9 810 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 IFRD2Q12894 506 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 USP4Q13107 963 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 TAF3Q5VWG9 929 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 TANGO2Q6ICL3 276 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 MSANTD2Q6P1R3 559 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 ARCQ7LC44 396 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 TADA2BQ86TJ2 420 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 PHF13Q86YI8 300 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 RNF135Q8IUD6 432 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 PASD1Q8IV76 773 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 SLC44A3Q8N4M1 653 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 ARL14EPQ8N8R7 260 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 OR8K1Q8NGG5 319 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 IPO4Q8TEX9 1081 aaKnown RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 DEPDC1BQ8WUY9 529 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 USP13Q92995 863 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 ZFRQ96KR1 1074 aaKnown RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 NECAB3Q96P71 396 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-205ENST00000506963 SLC22A12Q96S37 553 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 PCDHB18PQ96TA0 734 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 TRIM62Q9BVG3 475 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 RNF38Q9H0F5 515 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 PDCL3Q9H2J4 239 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 SLITRK6Q9H5Y7 841 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 TRPV5Q9NQA5 729 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 ABCC13Q9NSE7 274 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 NAGPAQ9UK23 515 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 SORCS3Q9UPU3 1222 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 NUMBLQ9Y6R0 609 aa10.21□□□□□ -0.77
SFXN1-205ENST00000506963 MFAP3LO75121 409 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 LTFP02788 710 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 ERBB2P04626 1255 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 SERPING1P05155 500 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 CKMP06732 381 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 TPM1P09493 284 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 RALAP11233 206 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 GZMAP12544 262 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 RARGP13631 454 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 LCP1P13796 627 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 PSMC3P17980 439 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 CDC25BP30305 580 aa10.2□□□□□ -0.78
SFXN1-205ENST00000506963 ATP5C1P36542 298 aaKnown RBP10.2□□□□□ -0.78
SFXN1-205ENST00000506963 CDK17Q00537 523 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms