RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 IRGQQ8WZA9 623 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 NDRG1Q92597 394 aaKnown RBP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 MRPS31Q92665 395 aaKnown RBP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 ZSWIM3Q96MP5 696 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 GCNAQ96QF7 691 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 SLC46A2Q9BY10 475 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 TASP1Q9H6P5 420 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 NMUR1Q9HB89 426 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 TLR8Q9NR97 1041 aaKnown RBP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 ST7Q9NRC1 585 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 OSER1Q9NX31 292 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 EPS15L1Q9UBC2 864 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 ZMYM5Q9UJ78 669 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 DOCK8Q8NF50 2099 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 A0A1W2PQH9 124 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 SSU72P8A0A1W2PR75 194 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 C2orf78A6NCI8 922 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 YJEFN3A6XGL0 299 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 LOC730098B7Z3J9 87 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 E7ENQ6 273 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 OLFM2O95897 454 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 OAS1P00973 400 aaKnown RBP13.49□□□□□ -0.25
TCOF1-210ENST00000506767 GZMAP12544 262 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 LAMP2P13473 410 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 FECHP22830 423 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 MMP8P22894 467 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 TUBP50607 506 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 SNX16P57768 344 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 PTP4A2Q12974 167 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
TCOF1-210ENST00000506767 ASTE1Q2TB18 679 aaPredicted RBP13.49□□□□□ -0.25
TCOF1-210ENST00000506767 ARHGAP15Q53QZ3 475 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
TCOF1-210ENST00000506767 GPR158Q5T848 1215 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 TXNDC8Q6A555 127 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 ACAD10Q6JQN1 1059 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 PHF13Q86YI8 300 aaPredicted RBP13.49□□□□□ -0.25
TCOF1-210ENST00000506767 ARHGAP18Q8N392 663 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 MCRS1Q96EZ8 462 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
TCOF1-210ENST00000506767 MIS12Q9H081 205 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 ZNHIT6Q9NWK9 470 aaKnown RBP13.49□□□□□ -0.25
TCOF1-210ENST00000506767 CLIC5Q9NZA1 410 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 NR2E1Q9Y466 385 aa13.49□□□□□ -0.25
TCOF1-210ENST00000506767 NUP210Q8TEM1 1887 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 TTC28Q96AY4 2481 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 C2CD4DB7Z1M9 353 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 SART1O43290 800 aaKnown RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 NSFP46459 744 aaKnown RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 GSCP56915 257 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 YWHAGP61981 247 aaKnown RBP eCLIP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 PPP1R2P3Q6NXS1 205 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 OLFML1Q6UWY5 402 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 HFE2Q6ZVN8 426 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 FAM183BPQ6ZVS7 135 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 BEND5Q7L4P6 421 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 XYLT1Q86Y38 959 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 ZDHHC17Q8IUH5 632 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 ADHFE1Q8IWW8 467 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 ZDHHC14Q8IZN3 488 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 MAB21L3Q8N8X9 362 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 ACSF2Q96CM8 615 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 PANX2Q96RD6 677 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 SLC22A12Q96S37 553 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 UHRF1Q96T88 793 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 CHP1Q99653 195 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 RNF38Q9H0F5 515 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 TRPV4Q9HBA0 871 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 SEPT11Q9NVA2 429 aaKnown RBP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
TCOF1-210ENST00000506767 TAS2R14Q9NYV8 317 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 ADAMTS1Q9UHI8 967 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 NENFQ9UMX5 172 aa13.48□□□□□ -0.25
TCOF1-210ENST00000506767 A0A087X0T9 212 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ABL1P00519 1130 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 LTFP02788 710 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 FYNP06241 537 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 FAM228BP0C875 321 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 RARGP13631 454 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 SCNN1AP37088 669 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 EIF4A3P38919 411 aaKnown RBP13.47□□□□□ -0.25
TCOF1-210ENST00000506767 SLC6A3Q01959 620 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ZP2Q05996 745 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ZNF268Q14587 947 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-210ENST00000506767 FAM78AQ5JUQ0 283 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 HECTD3Q5T447 861 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 BSPRYQ5W0U4 402 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 OR6B2Q6IFH4 312 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms