RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 KIAA1257Q9ULG3 409 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 SH3BP1Q9Y3L3 701 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 PCDHB4Q9Y5E5 795 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 A0A1W2PQH9 124 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 E2F8A0AVK6 867 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 PRR23AA6NEV1 266 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 GOLGA6L22H0YM25 854 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 SCAMP3O14828 347 aaKnown RBP16.41■□□□□ 0.22
CLDND1-211ENST00000506575 VDRP11473 427 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 DRD1P21728 446 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 ATP5C1P36542 298 aaKnown RBP16.41■□□□□ 0.22
CLDND1-211ENST00000506575 PSEN1P49768 467 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 GALK1P51570 392 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 BCAT1P54687 386 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 NRLP54845 237 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 GOLGA8FQ08AF8 430 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 GOLGA8DPQ0D2H9 430 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 TSSK4Q6SA08 328 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 Q6ZS52 159 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 CCDC186Q7Z3E2 898 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 TADA2BQ86TJ2 420 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 UBR7Q8N806 425 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 LMO3Q8TAP4 145 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 CD101Q93033 1021 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 CHFRQ96EP1 664 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 FAM126AQ9BYI3 521 aaPredicted RBP16.41■□□□□ 0.22
CLDND1-211ENST00000506575 LMBRD1Q9NUN5 540 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 ZSCAN32Q9NX65 697 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 TSPAN16Q9UKR8 245 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 PCDHGA2Q9Y5H1 932 aa16.41■□□□□ 0.22
CLDND1-211ENST00000506575 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 ADH1CP00326 375 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 PAEPP09466 180 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 IRF1P10914 325 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 RARGP13631 454 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 PGFP49763 221 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 GCNT1Q02742 428 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 BST2Q10589 180 aaKnown RBP16.4■□□□□ 0.22
CLDND1-211ENST00000506575 FSTL4Q6MZW2 842 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 RRAGAQ7L523 313 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 ASCL5Q7RTU5 278 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 PIGZQ86VD9 579 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 ADGRG2Q8IZP9 1017 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 OTUB2Q96DC9 234 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
CLDND1-211ENST00000506575 INTS2Q9H0H0 1204 aaKnown RBP16.4■□□□□ 0.22
CLDND1-211ENST00000506575 CYLDQ9NQC7 956 aa16.4■□□□□ 0.22
CLDND1-211ENST00000506575 ATG2BQ96BY7 2078 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 PTPRZ1P23471 2315 aaPredicted RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 XPO1O14980 1071 aaKnown RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 ATG13O75143 517 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 TBX18O95935 607 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 EGFP01133 1207 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 LMNAP02545 664 aaKnown RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 CYP17A1P05093 508 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 RALAP11233 206 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 SATB1Q01826 763 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 PDE4CQ08493 712 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 GAS6Q14393 721 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 DHCR24Q15392 516 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 FBXO43Q4G163 708 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 C10orf120Q5SQS8 335 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 TTC30AQ86WT1 665 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 ARHGAP18Q8N392 663 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 RBBP8NLQ8NC74 664 aaPredicted RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 KAT5Q92993 513 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 IPO9Q96P70 1041 aaKnown RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 CDK5RAP1Q96SZ6 601 aaKnown RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 LRRC4Q9HBW1 653 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 OSER1Q9NX31 292 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 DNMT3LQ9UJW3 386 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 LSM7Q9UK45 103 aaKnown RBP16.39■□□□□ 0.21
CLDND1-211ENST00000506575 USP3Q9Y6I4 520 aa16.39■□□□□ 0.21
CLDND1-211ENST00000506575 MYOFQ9NZM1 2061 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 O00370 1275 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 RNF40O75150 1001 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 SETSIPP0DME0 302 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 ADH5P11766 374 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 ERCC5P28715 1186 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-211ENST00000506575 TKTL1P51854 596 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 RAB41Q5JT25 222 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 NAIF1Q69YI7 327 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-211ENST00000506575 KLHDC10Q6PID8 442 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 CCDC26Q8TAB7 109 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 MED15Q96RN5 788 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 KLF16Q9BXK1 252 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-211ENST00000506575 FBRSL1Q9HCM7 1045 aaKnown RBP16.38■□□□□ 0.21
CLDND1-211ENST00000506575 CLIC5Q9NZA1 410 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 NUDT5Q9UKK9 219 aa16.38■□□□□ 0.21
CLDND1-211ENST00000506575 PAPSS2O95340 614 aaPredicted RBP16.37■□□□□ 0.21
CLDND1-211ENST00000506575 ZBED1O96006 694 aa16.37■□□□□ 0.21
CLDND1-211ENST00000506575 KRT5P13647 590 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms