RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TCRBV9S1A1TA0A576 114 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 TMEM191CA6NGB0 347 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 TRMUO75648 421 aaKnown RBP16.5■□□□□ 0.23
SCLT1-208ENST00000506368 PGM3O95394 542 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 TMEM191BP0C7N4 346 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 RAG1P15918 1043 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 SERPINB6P35237 376 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 ALDH1A3P47895 512 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 APOFQ13790 326 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 DHRS4L2Q6PKH6 230 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 RNF111Q6ZNA4 994 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 CBWD2Q8IUF1 395 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 ERI1Q8IV48 349 aaKnown RBP16.5■□□□□ 0.23
SCLT1-208ENST00000506368 MAP4K3Q8IVH8 894 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 ADCY4Q8NFM4 1077 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 WRAP73Q9P2S5 460 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-208ENST00000506368 ZNHIT2Q9UHR6 403 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 CCDC160A6NGH7 325 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 E9PBE3 544 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 H3BNX3 289 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
SCLT1-208ENST00000506368 KRT38O76015 456 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 GJC1P36383 396 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 CHI3L2Q15782 390 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 GRAMD1BQ3KR37 738 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 BBS9Q3SYG4 887 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 MSS51Q4VC12 460 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 DACT2Q5SW24 774 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 PQLC1Q8N2U9 271 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 BBS5Q8N3I7 341 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 FBXW8Q8N3Y1 598 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 SMYD1Q8NB12 490 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 C12orf65Q9H3J6 166 aaKnown RBP16.5■□□□□ 0.23
SCLT1-208ENST00000506368 XPO7Q9UIA9 1087 aaKnown RBP16.5■□□□□ 0.23
SCLT1-208ENST00000506368 POMPQ9Y244 141 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
SCLT1-208ENST00000506368 GOLGA8SH3BPF8 625 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 GOLGA8MH3BSY2 632 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 CRHR1P34998 444 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 HDAC4P56524 1084 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 CYP24A1Q07973 514 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 CBX3Q13185 183 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 STX3Q13277 289 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 CNGA3Q16281 694 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 KBTBD12Q3ZCT8 623 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 FBXL19Q6PCT2 694 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 C15orf39Q6ZRI6 1047 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 THNSL1Q8IYQ7 743 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 SLC25A41Q8N5S1 370 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 ZFP28Q8NHY6 868 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 PIWIL2Q8TC59 973 aaKnown RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 CCDC127Q96BQ5 260 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 WDR83Q9BRX9 315 aaKnown RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 ADAM33Q9BZ11 813 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 TEX264Q9Y6I9 313 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 TISP43B9A030 160 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 CBFA2T3O75081 653 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 LGR5O75473 907 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 BPGMP07738 259 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 C6orf222P0C671 652 aaPredicted RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 FAM58BPP0C7Q3 252 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 PMLP29590 882 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 L1CAMP32004 1257 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 DSG3P32926 999 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 PPIDQ08752 370 aaKnown RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 TLR1Q15399 786 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 RABGAP1LQ5R372 815 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 ANKRD22Q5VYY1 191 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 BBS12Q6ZW61 710 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 ZNF410Q86VK4 478 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 ZNF526Q8TF50 670 aaPredicted RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 DCUN1D1Q96GG9 259 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 SENP6Q9GZR1 1112 aaPredicted RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 DNAJC28Q9NX36 388 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 CNOT11Q9UKZ1 510 aaKnown RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 PRPF19Q9UMS4 504 aaKnown RBP16.49■□□□□ 0.23
SCLT1-208ENST00000506368 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
SCLT1-208ENST00000506368 TRIM49D1C9J1S8 452 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 H0YJX3 145 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 DNAJA2O60884 412 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 VIL1P09327 827 aaKnown RBP16.48■□□□□ 0.23
SCLT1-208ENST00000506368 WEE2P0C1S8 567 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 CNTFP26441 200 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 RPL22P35268 128 aaKnown RBP16.48■□□□□ 0.23
SCLT1-208ENST00000506368 RARRES1P49788 294 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 SERPINB9P50453 376 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 MTTPP55157 894 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 NCOA4Q13772 614 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 SLC44A4Q53GD3 710 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 SERPINI1Q99574 410 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 XAB2Q9HCS7 855 aaKnown RBP16.48■□□□□ 0.23
SCLT1-208ENST00000506368 CNTN6Q9UQ52 1028 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
SCLT1-208ENST00000506368 PI4K2BG5E9Z4 385 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 CHADO15335 359 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 BANF1O75531 89 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 LSM8O95777 96 aaKnown RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 KRT7P08729 469 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms