RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.79■□□□□ 0.44
SYNE4-207ENST00000505054 PRR5-ARHGAP8B1AHC4 643 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 GOLGA6L19H0YKK7 550 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 TULP2O00295 520 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 USP8P40818 1118 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 BCAT1P54687 386 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 TPM4P67936 248 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 ARHGAP8P85298 464 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 IFRD2Q12894 506 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-207ENST00000505054 GRM2Q14416 872 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 DRAP1Q14919 205 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-207ENST00000505054 CNGA2Q16280 664 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 PKDCCQ504Y2 493 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 FAM78AQ5JUQ0 283 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 GPR158Q5T848 1215 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 SMYD5Q6GMV2 418 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 FAM71AQ8IYT1 594 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 ZNF687Q8N1G0 1237 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 ASB16Q96NS5 453 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 GCNAQ96QF7 691 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 TRMT61BQ9BVS5 477 aaKnown RBP17.78■□□□□ 0.44
SYNE4-207ENST00000505054 GMEB2Q9UKD1 530 aa17.78■□□□□ 0.44
SYNE4-207ENST00000505054 CDV3Q9UKY7 258 aaKnown RBP17.78■□□□□ 0.44
SYNE4-207ENST00000505054 GREB1Q4ZG55 1949 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 FAM92AA1XBS5 289 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 F8VZ95 297 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 CYP26A1O43174 497 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 RTN3O95197 1032 aaPredicted RBP17.77■□□□□ 0.44
SYNE4-207ENST00000505054 TDGF1P13385 188 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 YWHAQP27348 245 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 FANCCQ00597 558 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 PDE4CQ08493 712 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 BST2Q10589 180 aaKnown RBP17.77■□□□□ 0.44
SYNE4-207ENST00000505054 TAF10Q12962 218 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 PPP2R5DQ14738 602 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 ARHGAP15Q53QZ3 475 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 PIGZQ86VD9 579 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 UBA3Q8TBC4 463 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 ZSCAN18Q8TBC5 510 aaPredicted RBP17.77■□□□□ 0.44
SYNE4-207ENST00000505054 DEPDC1BQ8WUY9 529 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 IRF7Q92985 503 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 SLITRK6Q9H5Y7 841 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 TASP1Q9H6P5 420 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 TRPV5Q9NQA5 729 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 EHD2Q9NZN4 543 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 HESX1Q9UBX0 185 aa17.77■□□□□ 0.44
SYNE4-207ENST00000505054 NDRG2Q9UN36 371 aaKnown RBP17.77■□□□□ 0.44
SYNE4-207ENST00000505054 NUP210Q8TEM1 1887 aaPredicted RBP17.77■□□□□ 0.43
SYNE4-207ENST00000505054 NCANO14594 1321 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 CACNA1BQ00975 2339 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 M0QYV0 167 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 XPO1O14980 1071 aaKnown RBP17.76■□□□□ 0.43
SYNE4-207ENST00000505054 SERPINC1P01008 464 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 GNA15P30679 374 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 CLCN1P35523 988 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 NRLP54845 237 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 POLR2FP61218 127 aaKnown RBP17.76■□□□□ 0.43
SYNE4-207ENST00000505054 STILQ15468 1287 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 FILIP1LQ4L180 1135 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 TXNDC8Q6A555 127 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 VITQ6UXI7 678 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 MAMSTRQ6ZN01 415 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 RNF214Q8ND24 703 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 MRPS31Q92665 395 aaKnown RBP17.76■□□□□ 0.43
SYNE4-207ENST00000505054 SMARCD2Q92925 531 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 FBXO32Q969P5 355 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
SYNE4-207ENST00000505054 SLC46A2Q9BY10 475 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 STK33Q9BYT3 514 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 UBXN6Q9BZV1 441 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 COMMD8Q9NX08 183 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 USP18Q9UMW8 372 aa17.76■□□□□ 0.43
SYNE4-207ENST00000505054 C2orf78A6NCI8 922 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 ZNF840PA6NDX5 716 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 THAP12O43422 761 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 SETSIPP0DME0 302 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 PSMC3P17980 439 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 PLA2G4AP47712 749 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 PGFP49763 221 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 CCR3P51677 355 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 KIF11P52732 1056 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 ATXN1P54253 815 aaKnown RBP17.75■□□□□ 0.43
SYNE4-207ENST00000505054 JAM2P57087 298 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 NR1I3Q14994 352 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 RAB41Q5JT25 222 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 DENND1BQ6P3S1 775 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 SLC47A2Q86VL8 602 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 MON1AQ86VX9 555 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 MAB21L3Q8N8X9 362 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 NEK11Q8NG66 645 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 ZNF606Q8WXB4 792 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 FAM3CQ92520 227 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 RSPRY1Q96DX4 576 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 SLITRK1Q96PX8 696 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 RTKNQ9BST9 563 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 TRPV4Q9HBA0 871 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 NLRC4Q9NPP4 1024 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 TRPM5Q9NZQ8 1165 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 GMIPQ9P107 970 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 RAB23Q9ULC3 237 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms