RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NACA2Q9H009 215 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 MIR1-1HGQ9H1L0 117 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 PCIF1Q9H4Z3 704 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 DNAJC17Q9NVM6 304 aaKnown RBP7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 DNAAF2Q9NVR5 837 aaKnown RBP7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 EHD2Q9NZN4 543 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 TBC1D14Q9P2M4 693 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 DEC1Q9P2X7 70 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 APOBEC2Q9Y235 224 aaKnown RBP7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 KIF3AQ9Y496 699 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 CEP192Q8TEP8 1941 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 PLXND1Q9Y4D7 1925 aa7.34□□□□□ -1.23
NPIPB3-203ENST00000504841 PTPRJQ12913 1337 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 A0A1W2PQD8 194 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 A0A1W2PQF6 199 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 FAM221BA6H8Z2 402 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 NEDD8-MDP1E9PL57 170 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CLDN5O00501 218 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 HOXC11O43248 304 aaPredicted RBP7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 COCHO43405 550 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 SLC26A4O43511 780 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 ZNF217O75362 1048 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 LDHAP00338 332 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 TNNC2P02585 160 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CAPNS1P04632 268 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 IDEP14735 1019 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 GNSP15586 552 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 NTSR1P30989 418 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 PPP3CCP48454 512 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CASP5P51878 434 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CACNA2D1P54289 1103 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 POU5F1Q01860 360 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 L1TD1Q5T7N2 865 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 GRAMD4Q6IC98 578 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 SDE2Q6IQ49 451 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CCNI2Q6ZMN8 369 aaPredicted RBP7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 NUDT18Q6ZVK8 323 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CACUL1Q86Y37 369 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 ETFBKMTQ8IXQ9 262 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 ZCCHC9Q8N567 271 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 OR5B17Q8NGF7 314 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CXorf38Q8TB03 319 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 IPO4Q8TEX9 1081 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 TTLL2Q9BWV7 592 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 FGFBP2Q9BYJ0 223 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 SNX25Q9H3E2 840 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 DPEP3Q9H4B8 488 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 ST6GALNAC4Q9H4F1 302 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 PRDM16Q9HAZ2 1276 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 CACNA2D2Q9NY47 1150 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 SUSD2Q9UGT4 822 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 NME7Q9Y5B8 376 aa7.33□□□□□ -1.24
NPIPB3-203ENST00000504841 MYO18AQ92614 2054 aaKnown RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 E2F8A0AVK6 867 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 GJB3O75712 270 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 PRPF6O94906 941 aaKnown RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 GARTP22102 1010 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 WARSP23381 471 aaKnown RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 YWHAQP27348 245 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 LONP1P36776 959 aaKnown RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 TNNC1P63316 161 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 NOP14P78316 857 aaKnown RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 SLC14A1Q13336 389 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 PREPLQ4J6C6 727 aaPredicted RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 SYCP2LQ5T4T6 812 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 TPGS1Q6ZTW0 290 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 TOGARAM2Q6ZUX3 1019 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 USP49Q70CQ1 688 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 DPH6Q7L8W6 267 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 SLCO6A1Q86UG4 719 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 TMEM25Q86YD3 366 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 CBWD2Q8IUF1 395 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 GPD1LQ8N335 351 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 PDZD8Q8NEN9 1154 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 MYCBPAPQ8TBZ2 947 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 SCFD1Q8WVM8 642 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 BHMTQ93088 406 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 WBP2Q969T9 261 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 CRELD1Q96HD1 420 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 C8orf48Q96LL4 319 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 MED10Q9BTT4 135 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 BBS2Q9BXC9 721 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 TRIM9Q9C026 710 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 ELOVL4Q9GZR5 314 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 FAM124BQ9H5Z6 455 aaPredicted RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 CCSER2Q9H7U1 834 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 IL21RQ9HBE5 538 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 SPHK2Q9NRA0 654 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 TMEM30AQ9NV96 361 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 INTS13Q9NVM9 706 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 GMIPQ9P107 970 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 CHORDC1Q9UHD1 332 aaPredicted RBP7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 PCOLCE2Q9UKZ9 415 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 HCN2Q9UL51 889 aa7.32□□□□□ -1.24
NPIPB3-203ENST00000504841 A0A0A0MRY4 1105 aa7.31□□□□□ -1.24
NPIPB3-203ENST00000504841 FAM149AA5PLN7 773 aa7.31□□□□□ -1.24
NPIPB3-203ENST00000504841 A8MXQ7 604 aa7.31□□□□□ -1.24
NPIPB3-203ENST00000504841 WASH3PC4AMC7 463 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms