RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 HDAC4P56524 1084 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 KRT81Q14533 505 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 SLC1A5Q15758 541 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 CA9Q16790 459 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 C9orf57Q5W0N0 161 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 CYB5D1Q6P9G0 228 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 C1orf228Q6PIY5 440 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 PLEKHH3Q7Z736 793 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 IGDCC3Q8IVU1 814 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 PCDH19Q8TAB3 1148 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 DCAKDQ8WVC6 231 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 MRRFQ96E11 262 aaKnown RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 OSMRQ99650 979 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 C11orf84Q9BUA3 381 aaPredicted RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 NXF3Q9H4D5 531 aaKnown RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 HESX1Q9UBX0 185 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 NRCAMQ92823 1304 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 PDCD11Q14690 1871 aaKnown RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 ZNF487B1APH4 448 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 H7C0C1 242 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 CHADO15335 359 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 CA4P22748 312 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 ATP5OP48047 213 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 RPL34P49207 117 aaKnown RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 MGAT5Q09328 741 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 MTM1Q13496 603 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 PDK4Q16654 411 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 FAM110CQ1W6H9 321 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 FAM133BQ5BKY9 247 aaKnown RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 RNF43Q68DV7 783 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 PALM2Q8IXS6 379 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 GBP7Q8N8V2 638 aaPredicted RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 KBTBD7Q8WVZ9 684 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 LPIN3Q9BQK8 851 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 PITPNM3Q9BZ71 974 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 DPEP3Q9H4B8 488 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 TEX264Q9Y6I9 313 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 PIRO00625 290 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 APOL1O14791 398 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 RECQL4O94761 1208 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 KRT4P19013 534 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 ELK3P41970 407 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 PTPN9P43378 593 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 SNX16P57768 344 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 HIC1Q14526 733 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 CRYBG2Q8N1P7 616 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 AGGF1Q8N302 714 aaeCLIP13.58□□□□□ -0.241e-9■□□□□ 10.7
MATR3-233ENST00000504203 OR6B3Q8NGW1 331 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 CENPIQ92674 756 aaPredicted RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 RMDN2Q96LZ7 410 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 PAIP2Q9BPZ3 127 aaKnown RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 ADAM33Q9BZ11 813 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 PAK5Q9P286 719 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 GGT7Q9UJ14 662 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 UBQLN1Q9UMX0 589 aaKnown RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 GNEQ9Y223 722 aaKnown RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 STARD13Q9Y3M8 1113 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 BCLAF3A2AJT9 711 aaKnown RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 CFAP69A5D8W1 941 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 DYNC1LI2O43237 492 aaPredicted RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 HCRTO43612 131 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 PIAS1O75925 651 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 FGFR1P11362 822 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 TFE3P19532 575 aaPredicted RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 SCNN1AP37088 669 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 BCAR1P56945 870 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 ADAM17P78536 824 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 BNIP1Q12981 228 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 SLC26A9Q7LBE3 791 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 ARCQ7LC44 396 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
MATR3-233ENST00000504203 FITM2Q8N6M3 262 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 PPP1R13LQ8WUF5 828 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 PTPN18Q99952 460 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 CHMP2BQ9UQN3 213 aa13.58□□□□□ -0.24
MATR3-233ENST00000504203 ZNF236Q9UL36 1845 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 A8MXQ7 604 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 CYP2C9P11712 490 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 AKAP5P24588 427 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 RBL1P28749 1068 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 MAGEA6P43360 314 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 NCALDP61601 193 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 DNAJC3Q13217 504 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 DPYSL2Q16555 572 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 XKR4Q5GH76 650 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 FBXO47Q5MNV8 452 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 FAM47EQ6ZV65 393 aa13.57□□□□□ -0.24
MATR3-233ENST00000504203 LIMS2Q7Z4I7 341 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms