RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MYL6P60660 151 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 GRIK4Q16099 956 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 MAP1SQ66K74 1059 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 CHSY1Q86X52 802 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 HDAC7Q8WUI4 952 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 SLC35C1Q96A29 364 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 CNDP1Q96KN2 507 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 VPS9D1Q9Y2B5 631 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
HMGXB3-202ENST00000503427 TRPC1P48995 793 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ZNF844Q08AG5 666 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 MTDHQ86UE4 582 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 MCOLN2Q8IZK6 566 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ATP6V0D2Q8N8Y2 350 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 EIF1ADQ8N9N8 165 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ATXN2LQ8WWM7 1075 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ASB7Q9H672 318 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 KCNMB3Q9NPA1 279 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 DDIT4Q9NX09 232 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 USP18Q9UMW8 372 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 FBXO21O94952 628 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 LHX1P48742 406 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SLC12A3P55017 1021 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ST8SIA6P61647 398 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SPDYCQ5MJ68 293 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 DENND1BQ6P3S1 775 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 LAYNQ6UX15 382 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ADGRF2Q8IZF7 708 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 DCLK3Q9C098 648 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ABI2Q9NYB9 513 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 TAGLN3Q9UI15 199 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 AAR2Q9Y312 384 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 CYP3A7-CYP3A51PA0A087WV96 503 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ZSCAN5CA6NGD5 496 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 CYP3A7P24462 503 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 PTPN11Q06124 597 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 C10orf120Q5SQS8 335 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 TMEM176AQ96HP8 235 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 RBBP8Q99708 897 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 MON2Q7Z3U7 1717 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 EML1O00423 815 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 PRPF4O43172 522 aaKnown RBP eCLIP16.69■□□□□ 0.263e-7■■■■□ 23.9
HMGXB3-202ENST00000503427 KDM1AO60341 852 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SOAT2O75908 522 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SYF2O95926 243 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ACO1P21399 889 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 PPIL2Q13356 520 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 PTRHD1Q6GMV3 140 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 NT5DC3Q86UY8 548 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 FAM172AQ8WUF8 416 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 FAM162AQ96A26 154 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 TMEM169Q96HH4 297 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 WDCPQ9H6R7 721 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 GPRC5DQ9NZD1 345 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SH3BP1Q9Y3L3 701 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 DAB1O75553 588 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 ATP6V1E1P36543 226 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 AQP5P55064 265 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 VCPP55072 806 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 GCNT1Q02742 428 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SKIV2LQ15477 1246 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 CATSPERGQ6ZRH7 1159 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 RIOX2Q8IUF8 465 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 PLD3Q8IV08 490 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 TMEM120AQ9BXJ8 343 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 SHCBP1LQ9BZQ2 653 aa16.69■□□□□ 0.26
HMGXB3-202ENST00000503427 DCDC2CA8MYV0 355 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 ACKR2O00590 384 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 ADORA2AP29274 412 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 PLOD1Q02809 727 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 TAF2Q6P1X5 1199 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 UNC45BQ8IWX7 931 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 CPB2Q96IY4 423 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 VCPIP1Q96JH7 1222 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 FOPNLQ96NB1 174 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 ANKRD27Q96NW4 1050 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 MUC3BQ9H195 1237 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 MAP2K7O14733 419 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 RHOBTB1O94844 696 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 FGRP09769 529 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 SKOR1P84550 965 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 RASA2Q15283 850 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 VSIG10LQ86VR7 867 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 RAB42Q8N4Z0 105 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 ACTL9Q8TC94 416 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 DDI1Q8WTU0 396 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 SGF29Q96ES7 293 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 IL1RAPL1Q9NZN1 696 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 PCDHA3Q9Y5H8 950 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 KNDC1Q76NI1 1749 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 FAM153BP0C7A2 387 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 FAM153CQ494X1 144 aa16.68■□□□□ 0.26
HMGXB3-202ENST00000503427 ZCWPW2Q504Y3 356 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms