RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 MPEG1Q2M385 716 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 SLC35G1Q2M3R5 365 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZIK1Q3SY52 487 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 FAM153CQ494X1 144 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 FAM83BQ5T0W9 1011 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 RBM20Q5T481 1227 aaKnown RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 GORABQ5T7V8 394 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 CACHD1Q5VU97 1274 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 CATSPERGQ6ZRH7 1159 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 KCTD20Q7Z5Y7 419 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 MYLK4Q86YV6 388 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 SYTL1Q8IYJ3 562 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 BPIFB1Q8TDL5 484 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 POF1BQ8WVV4 589 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 PPP2R3CQ969Q6 453 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZNF566Q969W8 418 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 FBXL20Q96IG2 436 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 CRB3Q9BUF7 120 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 PTDSS2Q9BVG9 487 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 SELENOOQ9BVL4 669 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 WDR12Q9GZL7 423 aaKnown RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 MYH16Q9H6N6 1097 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 AS3MTQ9HBK9 375 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 PTPRHQ9HD43 1115 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 XPNPEP3Q9NQH7 507 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 TRMT13Q9NUP7 481 aaKnown RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 TUBA8Q9NY65 449 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 MTMR4Q9NYA4 1195 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZNF112Q9UJU3 913 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 SPATA31A3Q5VYP0 1347 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 MYMKA6NI61 221 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 CLCA1A8K7I4 914 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 IFRD1O00458 451 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 PPP6CO00743 305 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 ADAMTS3O15072 1205 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCP110O43303 1012 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 RGS10O43665 173 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 RRP9O43818 475 aaKnown RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 PLA2G6O60733 806 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 INMTO95050 263 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 RASAL1O95294 804 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 NDST3O95803 873 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 A1BGP04217 495 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 TUBB4AP04350 444 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 MYL4P12829 197 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 TPH1P17752 444 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 EPHB2P29323 1055 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 CD6P30203 668 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 TRAPPC10P48553 1259 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 PTDSS1P48651 473 aaKnown RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 CPT1AP50416 773 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 DGKEP52429 567 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 PRKAG1P54619 331 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 NXPH1P58417 271 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 TNFAIP2Q03169 654 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 MYO1EQ12965 1108 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 TRIM14Q14142 442 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 E2F2Q14209 437 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 STARD3Q14849 445 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 NPY5RQ15761 445 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 GRAMD1BQ3KR37 738 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 ARHGAP40Q5TG30 622 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 VPS53Q5VIR6 699 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 PLAG1Q6DJT9 500 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 FCRL6Q6DN72 434 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 RGS7BPQ6MZT1 257 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 GGT6Q6P531 493 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZNF782Q6ZMW2 699 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 SMC5Q8IY18 1101 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 EXOC8Q8IYI6 725 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 FANCBQ8NB91 859 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCDC150Q8NCX0 1101 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 SMCR8Q8TEV9 937 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 MARK4Q96L34 752 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 HAPLN3Q96S86 360 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 NELL2Q99435 816 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 MAGEB5Q9BZ81 275 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 CXorf36Q9H7Y0 433 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 HEYLQ9NQ87 328 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 RGS17Q9UGC6 210 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 NDRG4Q9ULP0 352 aaKnown RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 MAGED2Q9UNF1 606 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 CDY1Q9Y6F8 540 aa2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 FNDC1Q4ZHG4 1894 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P35-201ENST00000503360 A0A087WV62 115 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 A0A087WZ62 844 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 LOC102724159A0A0B4J2E5 919 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAM234BA2RU67 622 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 ADM5C9JUS6 153 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 HNRNPDLO14979 420 aaKnown RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PPM1DO15297 605 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 TCEA3O75764 348 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 EIF3JO75822 258 aaKnown RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PIAS2O75928 621 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 KCNA3P22001 575 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PPIFP30405 207 aaKnown RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PLCD1P51178 756 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms