RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 A8MXQ7 604 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 SPTLC1O15269 473 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 CST8O60676 142 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 KPNA6O60684 536 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 ITGAVP06756 1048 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 CD48P09326 243 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 IMPDH2P12268 514 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 PDGFRAP16234 1089 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 LSP1P33241 339 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 PNPLA4P41247 253 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 TAF5Q15542 800 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 PREPLQ4J6C6 727 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 TAF2Q6P1X5 1199 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 FAM228AQ86W67 206 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 RAVER1Q8IY67 606 aaKnown RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 KCTD6Q8NC69 237 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 KBTBD7Q8WVZ9 684 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 GLMNQ92990 594 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 DPEP3Q9H4B8 488 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 DNAJC17Q9NVM6 304 aaKnown RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 GDAP2Q9NXN4 497 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 TMEM88BA6NKF7 163 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 FAM155AB1AL88 458 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 DPYSL4O14531 572 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 DNALI1O14645 258 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 GRAP2O75791 330 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ZSCAN5DPP0CG00 497 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 FGFR1P11362 822 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ETS1P14921 441 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 HSD3B2P26439 372 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ARSEP51690 589 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 DYNLT1P63172 113 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 OTUD4Q01804 1114 aaKnown RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 SOX4Q06945 474 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 SREBF2Q12772 1141 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 SH3PXD2AQ5TCZ1 1133 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 OLFML1Q6UWY5 402 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 TMEM110Q86TL2 294 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 TTC13Q8NBP0 860 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ACTL9Q8TC94 416 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 EPS8L3Q8TE67 593 aaKnown RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 HSPH1Q92598 858 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 PWWP2AQ96N64 755 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 PEBP4Q96S96 227 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 LPIN3Q9BQK8 851 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 MTG1Q9BT17 334 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 FOXP3Q9BZS1 431 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 SMIM23A6NLE4 172 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 FAM25EA8MYX2 175 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 RASGRF2O14827 1237 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 HCRTO43612 131 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ACSL3O95573 720 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 TTC4O95801 387 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 MYCLP1P12525 358 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 TAF6P49848 677 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 GJA9P57773 515 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 MRPS6P82932 125 aaKnown RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 SLC6A3Q01959 620 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 PLCB3Q01970 1234 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 NSUN2Q08J23 767 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP46-204ENST00000503060 C15orf59Q2T9L4 293 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 TWF2Q6IBS0 349 aaKnown RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 CCSAPQ6IQ19 270 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 CRYBG2Q8N1P7 616 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 BCAS4Q8TDM0 211 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ROPN1BQ9BZX4 212 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 ADAM7Q9H2U9 754 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 ROPN1Q9HAT0 212 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 GOLGA2P5Q9HBQ8 144 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 NINJ2Q9NZG7 142 aa12.08□□□□□ -0.48
USP46-204ENST00000503060 C6orf203Q9P0P8 240 aaPredicted RBP12.08□□□□□ -0.48
USP46-204ENST00000503060 GABBR2O75899 941 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 AGTP01019 485 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CYBAP13498 195 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 GNL1P36915 607 aaPredicted RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 PSMC4P43686 418 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 SNX16P57768 344 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 GPS1Q13098 491 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 PTGISQ16647 500 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 KYNUQ16719 465 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 SV2CQ496J9 727 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 RAB6CQ53S08 254 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 GNASQ5JWF2 1037 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CCBE1Q6UXH8 406 aaPredicted RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 CEP128Q6ZU80 1094 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CYP4V2Q6ZWL3 525 aaPredicted RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 LIMS2Q7Z4I7 341 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 MYLK4Q86YV6 388 aaPredicted RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 RFX6Q8HWS3 928 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 ZCCHC9Q8N567 271 aaKnown RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
USP46-204ENST00000503060 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms