RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 GOLGA8FQ08AF8 430 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 GOLGA8DPQ0D2H9 430 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 INCA1Q0VD86 236 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SEMA3BQ13214 749 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 STK38Q15208 465 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 NFIL3Q16649 462 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 DUOXA1Q1HG43 343 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 ZACNQ401N2 412 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 ZNF667Q5HYK9 610 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SH3PXD2AQ5TCZ1 1133 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 BTBD8Q5XKL5 378 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 TCEAL6Q6IPX3 200 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 PSAPL1Q6NUJ1 521 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 FAM173BQ6P4H8 233 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SHC4Q6S5L8 630 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 UNQ6494/PRO21346Q6UXR6 183 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 PIP4P1Q86T03 277 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 FUKQ8N0W3 1084 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 TTC39CQ8N584 583 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 ALLCQ8N6M5 410 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 TMC2Q8TDI7 906 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 TCEAL3Q969E4 200 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 CDK5RAP1Q96SZ6 601 aaKnown RBP6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 GABRG3Q99928 467 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 ZNF518BQ9C0D4 1074 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SLC32A1Q9H598 525 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 CAPN10Q9HC96 672 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 ARHGEF4Q9NR80 690 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 CFAP97Q9P2B7 532 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 WDR35Q9P2L0 1181 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 FBXO10Q9UK96 956 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SLC6A14Q9UN76 642 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 ZNF510Q9Y2H8 683 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SH3BP1Q9Y3L3 701 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 PCDHA5Q9Y5H7 936 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 CHD8Q9HCK8 2581 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 A0A1W2PQF6 199 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 K7ELQ4 463 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 EXOC3O60645 756 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 TULP3O75386 442 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 KIF20AO95235 890 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 KLF8O95600 359 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ASS1P00966 412 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 BCKDHBP21953 392 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 NTSR1P30989 418 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 RDXP35241 583 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ATP5C1P36542 298 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC6A11P48066 632 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 DHPSP49366 369 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC5A3P53794 718 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 MYL6P60660 151 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 CEBPZQ03701 1054 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 PDE4CQ08493 712 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF252P-AS1Q0IIN9 211 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ENPP2Q13822 863 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 CCDC6Q16204 474 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF699Q32M78 642 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 TRIM61Q5EBN2 209 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 LY6G5CQ5SRR4 150 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 RESP18Q5W5W9 173 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 LYSMD4Q5XG99 296 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SDE2Q6IQ49 451 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 CCDC186Q7Z3E2 898 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 TADA2BQ86TJ2 420 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM35AQ86V20 835 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 C12orf40Q86WS4 652 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 PDILTQ8N807 584 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF513Q8N8E2 541 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 GLIS3Q8NEA6 775 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 GATA6Q92908 595 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 FBXO32Q969P5 355 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SNX21Q969T3 373 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 CCDC127Q96BQ5 260 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF419Q96HQ0 510 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM84AQ96KN4 292 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 XPO6Q96QU8 1125 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 KCNK16Q96T55 309 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 HNRNPABQ99729 332 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 KLF16Q9BXK1 252 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ADAM33Q9BZ11 813 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 PANK2Q9BZ23 570 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 IRX2Q9BZI1 471 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 TPSD1Q9BZJ3 242 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 UBXN6Q9BZV1 441 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ZDHHC5Q9C0B5 715 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 DNAI2Q9GZS0 605 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 DPEP3Q9H4B8 488 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SMOC1Q9H4F8 434 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 CYP3A43Q9HB55 503 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 TLR8Q9NR97 1041 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 TMEM74BQ9NUR3 256 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 POLR3BQ9NW08 1133 aaPredicted RBP6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM13BQ9NYF5 915 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 CLIC5Q9NZA1 410 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SUSD2Q9UGT4 822 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 USP25Q9UHP3 1055 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 MBD1Q9UIS9 605 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms