RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TCF3P15923 654 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 ACADSBP45954 432 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 FCHO2Q0JRZ9 810 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 PDCLQ13371 301 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 GPIHBP1Q8IV16 184 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 SIX6OS1Q8N1H7 587 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 NUP58Q9BVL2 599 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 SMOC2Q9H3U7 446 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 CCSER2Q9H7U1 834 aa26.4■■□□□ 1.82
LSM6-202ENST00000502781 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.4■■□□□ 1.82
LSM6-202ENST00000502781 COCHO43405 550 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 CBFA2T2O43439 604 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 NARSO43776 548 aaKnown RBP26.39■■□□□ 1.82
LSM6-202ENST00000502781 TLR5O60602 858 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 TPM3P06753 285 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 ALADP13716 330 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 PSMC3P17980 439 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 DAOAP59103 153 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 ZXDAP98168 799 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 KLHDC10Q6PID8 442 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 SARM1Q6SZW1 724 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 PASD1Q8IV76 773 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 ARHGAP18Q8N392 663 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 IRGQQ8WZA9 623 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 SLC2A4RGQ9NR83 387 aa26.39■■□□□ 1.82
LSM6-202ENST00000502781 ITIH6Q6UXX5 1313 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 A0A1W2PQJ5 194 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 FBXO21O94952 628 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 SRFP11831 508 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 LCP1P13796 627 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 CHRNB2P17787 502 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 ZXDBP98169 803 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 CDR2Q01850 454 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 TAF3Q5VWG9 929 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 RIN3Q8TB24 985 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 SLC20A1Q8WUM9 679 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 EDAQ92838 391 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 IQCDQ96DY2 449 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 NAGPAQ9UK23 515 aa26.38■■□□□ 1.81
LSM6-202ENST00000502781 DPYSL4O14531 572 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 MMEP08473 750 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 RARGP13631 454 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 YWHAGP61981 247 aaKnown RBP eCLIP26.37■■□□□ 1.81
LSM6-202ENST00000502781 USP4Q13107 963 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 IRF2BP2Q7Z5L9 587 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 FMNL3Q8IVF7 1028 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 C1orf131Q8NDD1 294 aaKnown RBP26.37■■□□□ 1.81
LSM6-202ENST00000502781 BPIFB1Q8TDL5 484 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 NDRG1Q92597 394 aaKnown RBP26.37■■□□□ 1.81
LSM6-202ENST00000502781 ZFRQ96KR1 1074 aaKnown RBP26.37■■□□□ 1.81
LSM6-202ENST00000502781 ANP32EQ9BTT0 268 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 TRMT61BQ9BVS5 477 aaKnown RBP26.37■■□□□ 1.81
LSM6-202ENST00000502781 ST7Q9NRC1 585 aa26.37■■□□□ 1.81
LSM6-202ENST00000502781 LRRC53A6NM62 1247 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 YJEFN3A6XGL0 299 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 E7ENQ6 273 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 LSM8O95777 96 aaKnown RBP26.36■■□□□ 1.81
LSM6-202ENST00000502781 FERP16591 822 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 GPC5P78333 572 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 FMO1Q01740 532 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 ZNF77Q15935 545 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 TMEM35BQ8NCS4 154 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 CPXM1Q96SM3 734 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 AIPL1Q9NZN9 384 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 CEP83Q9Y592 693 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 MYO16Q9Y6X6 1858 aa26.36■■□□□ 1.81
LSM6-202ENST00000502781 E5RJQ4 531 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 PIK3R2O00459 728 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 DLL1O00548 723 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 PAPSS1O43252 624 aaPredicted RBP26.35■■□□□ 1.81
LSM6-202ENST00000502781 AP5Z1O43299 807 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 TBX18O95935 607 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 CYP1A1P04798 512 aaPredicted RBP26.35■■□□□ 1.81
LSM6-202ENST00000502781 CCDC172P0C7W6 258 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 GRM2Q14416 872 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 E4F1Q66K89 784 aaPredicted RBP26.35■■□□□ 1.81
LSM6-202ENST00000502781 SCUBE3Q8IX30 993 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 SH3RF2Q8TEC5 729 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 CLEC4CQ8WTT0 213 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 PPP1R13BQ96KQ4 1090 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 NOX5Q96PH1 765 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 CPQQ9Y646 472 aa26.35■■□□□ 1.81
LSM6-202ENST00000502781 ARNTLO00327 626 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 SART1O43290 800 aaKnown RBP26.34■■□□□ 1.81
LSM6-202ENST00000502781 MBL2P11226 248 aaPredicted RBP26.34■■□□□ 1.81
LSM6-202ENST00000502781 RALAP11233 206 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 ATP5C1P36542 298 aaKnown RBP26.34■■□□□ 1.81
LSM6-202ENST00000502781 NOMO3P69849 1222 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 ARID5AQ03989 594 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 PTPN20Q4JDL3 420 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 BSPRYQ5W0U4 402 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 KIAA1958Q8N8K9 716 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 CDK5RAP1Q96SZ6 601 aaKnown RBP26.34■■□□□ 1.81
LSM6-202ENST00000502781 SYT11Q9BT88 431 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 PDCL3Q9H2J4 239 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 EPHX3Q9H6B9 360 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 TJP2Q9UDY2 1190 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 CAPN11Q9UMQ6 739 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 TECTAO75443 2155 aa26.34■■□□□ 1.81
LSM6-202ENST00000502781 CHADO15335 359 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms