RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 EPHB4P54760 987 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 GABPB1Q06547 395 aaPredicted RBP3.96□□□□□ -1.78
SUB1-202ENST00000502453 PDK1Q15118 436 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 STXBP5Q5T5C0 1151 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 GLRX5Q86SX6 157 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 SIX6OS1Q8N1H7 587 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 TDRD5Q8NAT2 981 aaKnown RBP3.96□□□□□ -1.78
SUB1-202ENST00000502453 CCHCR1Q8TD31 782 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 PIMREGQ9BSJ6 248 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 PCED1AQ9H1Q7 454 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 VPS16Q9H269 839 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 NECTIN3Q9NQS3 549 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 ZBTB40Q9NUA8 1239 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 TAS2R10Q9NYW0 307 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 MORF4L1Q9UBU8 362 aa3.96□□□□□ -1.78
SUB1-202ENST00000502453 ARMCX3Q9UH62 379 aaPredicted RBP3.96□□□□□ -1.78
SUB1-202ENST00000502453 ZMYND8Q9ULU4 1186 aaPredicted RBP3.96□□□□□ -1.78
SUB1-202ENST00000502453 EME2A4GXA9 379 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 VWA3AA6NCI4 1184 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 MAN2B1O00754 1011 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 AURKAO14965 403 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 PRPF4O43172 522 aaKnown RBP eCLIP3.95□□□□□ -1.78
SUB1-202ENST00000502453 F9P00740 461 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TYRP14679 529 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 USP8P40818 1118 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 CPA2P48052 419 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ALDH18A1P54886 795 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 NME5P56597 212 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 KCNJ10P78508 379 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TTI2Q6NXR4 508 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 INTS5Q6P9B9 1019 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 HHIPL2Q6UWX4 724 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 GADL1Q6ZQY3 521 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 UNC5CLQ8IV45 518 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SCN4BQ8IWT1 228 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 GLB1L3Q8NCI6 653 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 CYP2W1Q8TAV3 490 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TCTN2Q96GX1 697 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SUCLG2Q96I99 432 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TMX3Q96JJ7 454 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 PIP5K1AQ99755 562 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 MRPL46Q9H2W6 279 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 KCNF1Q9H3M0 494 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 RIC8BQ9NVN3 520 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 POLR3BQ9NW08 1133 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 ANO10Q9NW15 660 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 LIMA1Q9UHB6 759 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 CNOT7Q9UIV1 285 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 INTS6Q9UL03 887 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 PCDHGA1Q9Y5H4 931 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SESN1Q9Y6P5 492 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 EVC2Q86UK5 1308 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SNAP23O00161 211 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ASAP2O43150 1006 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TPBGLP0DKB5 382 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 XRCC6P12956 609 aaKnown RBP eCLIP3.95□□□□□ -1.78
SUB1-202ENST00000502453 NCF1P14598 390 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 MCM3P25205 808 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ARL4DP49703 201 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 MRPL12P52815 198 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 POLGP54098 1239 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 MLLT6P55198 1093 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 HDAC4P56524 1084 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 IQCB1Q15051 598 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 MAPKAPK3Q16644 382 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 KCTD21Q4G0X4 260 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 LRRC24Q50LG9 513 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 DGLUCYQ7Z3D6 616 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 RABEPKQ7Z6M1 372 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 DENND6BQ8NEG7 585 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SNX27Q96L92 541 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 FCRL3Q96P31 734 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 MIPEPQ99797 713 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 OSBPL6Q9BZF3 934 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 GLT8D2Q9H1C3 349 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 CRISPLD1Q9H336 500 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 NCOR1P1Q9H4R4 102 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 MROH8Q9H579 483 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 KAT14Q9H8E8 782 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 PALMDQ9NP74 551 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 PIN4Q9Y237 131 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 CAB39Q9Y376 341 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 GOLGA6L10A0A0M3HER8 536 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 A8MXE2 369 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 MYO1GB0I1T2 1018 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 LINC01387J3KSC0 135 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TSPAN4O14817 238 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SLC16A6O15403 523 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 GCNT3O95395 438 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 PRAMEF1O95521 474 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 BMP2P12643 396 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SMPD1P17405 629 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 GABRB3P28472 473 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 RPS6KA3P51812 740 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 AFF1P51825 1210 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 ACY1Q03154 408 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 MGAT5Q09328 741 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SLBPQ14493 270 aaKnown RBP eCLIP3.95□□□□□ -1.78
SUB1-202ENST00000502453 PUM1Q14671 1186 aaKnown RBP eCLIP3.95□□□□□ -1.78
SUB1-202ENST00000502453 TTLL4Q14679 1199 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms