RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 GPD1LQ8N335 351 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 PNPLA1Q8N8W4 532 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 ZNF516Q92618 1163 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 TMX3Q96JJ7 454 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 FBXO2Q9UK22 296 aaPredicted RBP13.47□□□□□ -0.25
LMNA-218ENST00000502357 ASXL3Q9C0F0 2248 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 BPTFQ12830 3046 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 TBC1D3BA6NDS4 549 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 PRPF6O94906 941 aaKnown RBP13.46□□□□□ -0.25
LMNA-218ENST00000502357 GCNT3O95395 438 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 CISD3P0C7P0 127 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 HOXB2P14652 356 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 NTSR1P30989 418 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 GNL1P36915 607 aaPredicted RBP13.46□□□□□ -0.25
LMNA-218ENST00000502357 WASP42768 502 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 MYO1EQ12965 1108 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 HNRNPDQ14103 355 aaKnown RBP13.46□□□□□ -0.25
LMNA-218ENST00000502357 COL28A1Q2UY09 1125 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 DDX42Q86XP3 938 aaKnown RBP eCLIP13.46□□□□□ -0.25
LMNA-218ENST00000502357 PGBD3Q8N328 593 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 HDDC3Q8N4P3 179 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 TRIML1Q8N9V2 468 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 BAHD1Q8TBE0 780 aaPredicted RBP13.46□□□□□ -0.25
LMNA-218ENST00000502357 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.25
LMNA-218ENST00000502357 OVCA2Q8WZ82 227 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 ANKRD36BP1Q96IX9 119 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 KCNK16Q96T55 309 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 XYLT2Q9H1B5 865 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 CCSER2Q9H7U1 834 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 SPHK2Q9NRA0 654 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 CHORDC1Q9UHD1 332 aaPredicted RBP13.46□□□□□ -0.25
LMNA-218ENST00000502357 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
LMNA-218ENST00000502357 PCDHB13Q9Y5F0 798 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
LMNA-218ENST00000502357 KNL1Q8NG31 2342 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 URB1O60287 2271 aaKnown RBP13.45□□□□□ -0.26
LMNA-218ENST00000502357 CENPBP07199 599 aaPredicted RBP13.45□□□□□ -0.26
LMNA-218ENST00000502357 ANXA13P27216 316 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 YWHAQP27348 245 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 TUBP50607 506 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 C10orf76Q5T2E6 689 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 TDRD10Q5VZ19 366 aaKnown RBP13.45□□□□□ -0.26
LMNA-218ENST00000502357 TOGARAM2Q6ZUX3 1019 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 RABEPKQ7Z6M1 372 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 C1orf216Q8TAB5 229 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 DNASE2BQ8WZ79 361 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 MRGPRX1Q96LB2 322 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 HSPA12BQ96MM6 686 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 CLIC6Q96NY7 704 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 FBXO10Q9UK96 956 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 PCOLCE2Q9UKZ9 415 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 CYP8B1Q9UNU6 501 aa13.45□□□□□ -0.26
LMNA-218ENST00000502357 WASH3PC4AMC7 463 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 KIAA0391O15091 583 aaKnown RBP13.44□□□□□ -0.26
LMNA-218ENST00000502357 CACNG3O60359 315 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 ZNF217O75362 1048 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 STAU1O95793 577 aaKnown RBP13.44□□□□□ -0.26
LMNA-218ENST00000502357 BMP15O95972 392 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 ABL1P00519 1130 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 MAOBP27338 520 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 DUOXA2Q1HG44 320 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 C8orf34Q49A92 452 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 HTR3DQ70Z44 454 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 TRMT11Q7Z4G4 463 aaKnown RBP13.44□□□□□ -0.26
LMNA-218ENST00000502357 WDR49Q8IV35 697 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 NAXDQ8IW45 347 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 MDM1Q8TC05 714 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 HPS3Q969F9 1004 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 SLITRK1Q96PX8 696 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
LMNA-218ENST00000502357 ELOVL4Q9GZR5 314 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 IL21RQ9HBE5 538 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 WSB2Q9NYS7 404 aaPredicted RBP13.44□□□□□ -0.26
LMNA-218ENST00000502357 MARK1Q9P0L2 795 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
LMNA-218ENST00000502357 DKK4Q9UBT3 224 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 KIF3AQ9Y496 699 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 SRPRBQ9Y5M8 271 aaKnown RBP13.44□□□□□ -0.26
LMNA-218ENST00000502357 RAD54BQ9Y620 910 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 CABIN1Q9Y6J0 2220 aa13.44□□□□□ -0.26
LMNA-218ENST00000502357 SETXQ7Z333 2677 aaKnown RBP13.43□□□□□ -0.26
LMNA-218ENST00000502357 ZNF233A6NK53 670 aa13.43□□□□□ -0.26
LMNA-218ENST00000502357 TGFB1I1O43294 461 aa13.43□□□□□ -0.26
LMNA-218ENST00000502357 EIF5BO60841 1220 aaKnown RBP13.43□□□□□ -0.26
LMNA-218ENST00000502357 BEST1O76090 585 aa13.43□□□□□ -0.26
LMNA-218ENST00000502357 SYPP08247 313 aa13.43□□□□□ -0.26
LMNA-218ENST00000502357 ATXN3P54252 364 aaPredicted RBP13.43□□□□□ -0.26
LMNA-218ENST00000502357 GRIK2Q13002 908 aa13.43□□□□□ -0.26
LMNA-218ENST00000502357 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
LMNA-218ENST00000502357 ALCAMQ13740 583 aa13.43□□□□□ -0.26
LMNA-218ENST00000502357 ENPP2Q13822 863 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms