RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ATP2A2P16615 1042 aaKnown RBP10.27□□□□□ -0.77
CLIP1-204ENST00000501271 YWHAGP61981 247 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLIP1-204ENST00000501271 YWHAZP63104 245 aaKnown RBP10.27□□□□□ -0.77
CLIP1-204ENST00000501271 ACCSLQ4AC99 568 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 PKDCCQ504Y2 493 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 PLEKHG4Q58EX7 1191 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 ACOT1Q86TX2 421 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 VSIG1Q86XK7 387 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 PTPRN2Q92932 1015 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLIP1-204ENST00000501271 C16orf70Q9BSU1 422 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 SNRNP25Q9BV90 132 aaKnown RBP10.27□□□□□ -0.77
CLIP1-204ENST00000501271 PCDH18Q9HCL0 1135 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 ALG13Q9NP73 1137 aaKnown RBP10.27□□□□□ -0.77
CLIP1-204ENST00000501271 NPHS2Q9NP85 383 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 RAB6BQ9NRW1 208 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 HAO1Q9UJM8 370 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 HEY1Q9Y5J3 304 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 DPYSL4O14531 572 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 GABBR2O75899 941 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 DCTN3O75935 186 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 C1QAP02745 245 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 TFE3P19532 575 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 RBL1P28749 1068 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 GJA5P36382 358 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 ADCYAP1R1P41586 468 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 OVGP1Q12889 678 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 SEPT7Q16181 437 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PRPF39Q86UA1 669 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PPTC7Q8NI37 304 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PCDH19Q8TAB3 1148 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 SLC44A1Q8WWI5 657 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 LRMDAQ9H2I8 198 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 KANSL3Q9P2N6 904 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PDCD11Q14690 1871 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF638Q14966 1978 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 LOC102724159A0A0B4J2E5 919 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 APOL1O14791 398 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PAPSS1O43252 624 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 LPXNO60711 386 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 FAM155BO75949 473 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 MT-ND3P03897 115 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 T-ENOLP0DO92 83 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 MAP2K2P36507 400 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 NEK3P51956 506 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF200P98182 395 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PDK2Q15119 407 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PWP2Q15269 919 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 KYAT1Q16773 422 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 MARCH8Q5T0T0 291 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 SLC9A4Q6AI14 798 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 SH2D5Q6ZV89 423 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 FASTKD5Q7L8L6 764 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 NLRP9Q7RTR0 991 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 SCUBE3Q8IX30 993 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 RFWD2Q8NHY2 731 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 ALKBH8Q96BT7 664 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 RTP4Q96DX8 246 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 CFAP36Q96G28 342 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 ZMAT2Q96NC0 199 aaKnown RBP10.26□□□□□ -0.77
CLIP1-204ENST00000501271 LPIN3Q9BQK8 851 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 B3GNT5Q9BYG0 378 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 MIS12Q9H081 205 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PLAC1Q9HBJ0 212 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 PAK5Q9P286 719 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 TUBGCP4Q9UGJ1 667 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 KIAA1257Q9ULG3 409 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 TTLL3Q9Y4R7 772 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 SNX9Q9Y5X1 595 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 COL1A2P08123 1366 aa10.26□□□□□ -0.77
CLIP1-204ENST00000501271 IQANK1A0A1B0GTG1 560 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 HCRTO43612 131 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 NPTXRO95502 500 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 CBX6O95503 412 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 ZBED1O96006 694 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 INHBAP08476 426 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 TGM2P21980 687 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 ALDH3A1P30838 453 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 SDC4P31431 198 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 GRM5P41594 1212 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 ETV4P43268 484 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 HDAC4P56524 1084 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 BCAR1P56945 870 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 SLC6A3Q01959 620 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF792Q3KQV3 632 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 BOLA3Q53S33 107 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF449Q6P9G9 518 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 CAND1Q86VP6 1230 aaKnown RBP10.25□□□□□ -0.77
CLIP1-204ENST00000501271 CCDC125Q86Z20 511 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 MAP7D3Q8IWC1 876 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 SHCBP1Q8NEM2 672 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 CLEC4CQ8WTT0 213 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 TEKT4Q8WW24 435 aa10.25□□□□□ -0.77
CLIP1-204ENST00000501271 SLC7A6OSQ96CW6 309 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms