RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SOX5P35711 763 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 YWHAGP61981 247 aaKnown RBP eCLIP17.62■□□□□ 0.41
PRKCB-210ENST00000498739 SLC7A9P82251 487 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 PFKPQ01813 784 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 TAF3Q5VWG9 929 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 SCD5Q86SK9 330 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 ARHGAP18Q8N392 663 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 RIN3Q8TB24 985 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 SH3RF2Q8TEC5 729 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 NDRG1Q92597 394 aaKnown RBP17.62■□□□□ 0.41
PRKCB-210ENST00000498739 CNGB3Q9NQW8 809 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 THG1LQ9NWX6 298 aaKnown RBP17.62■□□□□ 0.41
PRKCB-210ENST00000498739 CA14Q9ULX7 337 aa17.62■□□□□ 0.41
PRKCB-210ENST00000498739 ZNF638Q14966 1978 aaKnown RBP17.62■□□□□ 0.41
PRKCB-210ENST00000498739 TMEM221A6NGB7 291 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 M0R296 226 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 GABBR2O75899 941 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 RALAP11233 206 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 ACADSBP45954 432 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 DAOAP59103 153 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 USP4Q13107 963 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 MTF1Q14872 753 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 ZNF77Q15935 545 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 ARHGAP29Q52LW3 1261 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 PM20D1Q6GTS8 502 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 NOP9Q86U38 636 aaKnown RBP17.61■□□□□ 0.41
PRKCB-210ENST00000498739 IRF7Q92985 503 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 ASIC4Q96FT7 647 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 ZFYVE19Q96K21 471 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 C1QTNF1Q9BXJ1 281 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 MIS12Q9H081 205 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 CYLDQ9NQC7 956 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.61■□□□□ 0.41
PRKCB-210ENST00000498739 IFNKQ9P0W0 207 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 WNT16Q9UBV4 365 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 CYTH4Q9UIA0 394 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 NUDT5Q9UKK9 219 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 CEP83Q9Y592 693 aa17.61■□□□□ 0.41
PRKCB-210ENST00000498739 ANAPC1Q9H1A4 1944 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 LEFTY2O00292 366 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 CHADO15335 359 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 TBX18O95935 607 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 ATP5C1P36542 298 aaKnown RBP17.6■□□□□ 0.41
PRKCB-210ENST00000498739 ZXDBP98169 803 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 PDCLQ13371 301 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 C10orf120Q5SQS8 335 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 BTBD8Q5XKL5 378 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 CC2D1AQ6P1N0 951 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-210ENST00000498739 BHLHA9Q7RTU4 235 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 SIX5Q8N196 739 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 C1orf131Q8NDD1 294 aaKnown RBP17.6■□□□□ 0.41
PRKCB-210ENST00000498739 EPS8L1Q8TE68 723 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 STK32AQ8WU08 396 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 DNASE1L2Q92874 299 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 SLC4A5Q9BY07 1137 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 LHX5Q9H2C1 402 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 C11orf16Q9NQ32 467 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 ARHGEF3Q9NR81 526 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 CLIC5Q9NZA1 410 aa17.6■□□□□ 0.41
PRKCB-210ENST00000498739 YJEFN3A6XGL0 299 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 E5RJQ4 531 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 E7ENQ6 273 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 MDM4O15151 490 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 FBXO21O94952 628 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 MMEP08473 750 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 TCF3P15923 654 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 RPL34P49207 117 aaKnown RBP17.59■□□□□ 0.41
PRKCB-210ENST00000498739 PLCB2Q00722 1185 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 ARID5AQ03989 594 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 TMEM31Q5JXX7 168 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 IER5LQ5T953 404 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 RSRC2Q7L4I2 434 aaKnown RBP17.59■□□□□ 0.41
PRKCB-210ENST00000498739 TADA2BQ86TJ2 420 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 DDX42Q86XP3 938 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRKCB-210ENST00000498739 SCML4Q8N228 414 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 WDTC1Q8N5D0 677 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 CSGALNACT1Q8TDX6 532 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 CLEC4CQ8WTT0 213 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 IRGQQ8WZA9 623 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 DDX1Q92499 740 aaKnown RBP17.59■□□□□ 0.41
PRKCB-210ENST00000498739 NOX5Q96PH1 765 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 CDK5RAP1Q96SZ6 601 aaKnown RBP17.59■□□□□ 0.41
PRKCB-210ENST00000498739 HEBP1Q9NRV9 189 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 GKN1Q9NS71 199 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 CFAP97Q9P2B7 532 aa17.59■□□□□ 0.41
PRKCB-210ENST00000498739 TTC28Q96AY4 2481 aa17.58■□□□□ 0.41
PRKCB-210ENST00000498739 KRBA1A5PL33 1030 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 PDGFBP01127 241 aaPredicted RBP17.58■□□□□ 0.4
PRKCB-210ENST00000498739 TPM3P06753 285 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 IRF1P10914 325 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 SLC44A4Q53GD3 710 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 BSPRYQ5W0U4 402 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 TRIM68Q6AZZ1 485 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 HFE2Q6ZVN8 426 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 ZNF677Q86XU0 584 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 SCUBE3Q8IX30 993 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 TTC8Q8TAM2 541 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 SLC20A1Q8WUM9 679 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 EDEM1Q92611 657 aa17.58■□□□□ 0.4
PRKCB-210ENST00000498739 GOLGA1Q92805 767 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms