RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TLR5O60602 858 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 FMO5P49326 533 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 SEC13P55735 322 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 CUL2Q13617 745 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 KIAA2013Q8IYS2 634 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 RPLP0P6Q8NHW5 317 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 METTL14Q9HCE5 456 aaKnown RBP17■□□□□ 0.31
NR1H3-227ENST00000498548 SMG5Q9UPR3 1016 aaKnown RBP17■□□□□ 0.31
NR1H3-227ENST00000498548 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 FAM186AA6NE01 2351 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 KIAA1549LQ6ZVL6 1849 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 RARGP13631 454 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 PPP1R2P41236 205 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 KIF11P52732 1056 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 UBE2HP62256 183 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 PRR23BQ6ZRT6 265 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 SCD5Q86SK9 330 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 C12orf40Q86WS4 652 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 DDX42Q86XP3 938 aaKnown RBP eCLIP16.99■□□□□ 0.31
NR1H3-227ENST00000498548 SFTPA1Q8IWL2 248 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 BBS7Q8IWZ6 715 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 RUBCNQ92622 972 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 FAXDC2Q96IV6 333 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 KLF16Q9BXK1 252 aaPredicted RBP16.99■□□□□ 0.31
NR1H3-227ENST00000498548 SRRTQ9BXP5 876 aaKnown RBP16.99■□□□□ 0.31
NR1H3-227ENST00000498548 DNAI2Q9GZS0 605 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 EPC1Q9H2F5 836 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 NCDNQ9UBB6 729 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 SLC8A2Q9UPR5 921 aa16.99■□□□□ 0.31
NR1H3-227ENST00000498548 E2F8A0AVK6 867 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 TULP2O00295 520 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 SLC9A3R1O14745 358 aaPredicted RBP16.98■□□□□ 0.31
NR1H3-227ENST00000498548 PAPSS2O95340 614 aaPredicted RBP16.98■□□□□ 0.31
NR1H3-227ENST00000498548 CALCAP01258 141 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 TUBP50607 506 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 MESP2Q0VG99 397 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 PAK1Q13153 545 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 GOLGA7BQ2TAP0 167 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 LY6G5CQ5SRR4 150 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 ARHGAP17Q68EM7 881 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 LONP2Q86WA8 852 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 TTC30AQ86WT1 665 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 NAT16Q8N8M0 369 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 UBA3Q8TBC4 463 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 NDRG1Q92597 394 aaKnown RBP16.98■□□□□ 0.31
NR1H3-227ENST00000498548 KAT5Q92993 513 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 EXOC4Q96A65 974 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 NAGPAQ9UK23 515 aa16.98■□□□□ 0.31
NR1H3-227ENST00000498548 RIF1Q5UIP0 2472 aaKnown RBP16.98■□□□□ 0.31
NR1H3-227ENST00000498548 BICDL2A1A5D9 508 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 K7EQS6 105 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 ATG13O75143 517 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 CD19P15391 556 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 ATP5C1P36542 298 aaKnown RBP16.97■□□□□ 0.31
NR1H3-227ENST00000498548 SIM2Q14190 667 aaPredicted RBP16.97■□□□□ 0.31
NR1H3-227ENST00000498548 PIGZQ86VD9 579 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 TTC39CQ8N584 583 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 UBR7Q8N806 425 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 HHIPQ96QV1 700 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 PNPLA8Q9NP80 782 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.97■□□□□ 0.31
NR1H3-227ENST00000498548 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 TBC1D14Q9P2M4 693 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 USP3Q9Y6I4 520 aa16.97■□□□□ 0.31
NR1H3-227ENST00000498548 RNF225M0QZC1 329 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-227ENST00000498548 ADH5P11766 374 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 KDSRQ06136 332 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 PDE4CQ08493 712 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 KCNH2Q12809 1159 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 FBXO43Q4G163 708 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 C2orf27AQ580R0 203 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 C10orf120Q5SQS8 335 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 EMC10Q5UCC4 262 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 RRAGAQ7L523 313 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 TMEM25Q86YD3 366 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 CREBRFQ8IUR6 639 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 ARHGEF19Q8IW93 802 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 KIAA1958Q8N8K9 716 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 ANKRD52Q8NB46 1076 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 LMO3Q8TAP4 145 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 NT5C1BQ96P26 610 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 PCDHB4Q9Y5E5 795 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 EML5Q05BV3 1969 aa16.96■□□□□ 0.31
NR1H3-227ENST00000498548 GREM1O60565 184 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 ADH1CP00326 375 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 HMBSP08397 361 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 YWHAEP62258 255 aaKnown RBP16.95■□□□□ 0.3
NR1H3-227ENST00000498548 DMC1Q14565 340 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 ANO4Q32M45 955 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 SGO2Q562F6 1265 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 TMEM270Q6UE05 265 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 CCDC186Q7Z3E2 898 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 WDR5BQ86VZ2 330 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 PPM1KQ8N3J5 372 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 CCDC33Q8N5R6 958 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 EHBP1Q8NDI1 1231 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms