RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 C2CD4BA6NLJ0 364 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 H3BUI4 141 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 CLIC1O00299 241 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 INPPL1O15357 1258 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 TMPRSS11DO60235 418 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 EPN2O95208 641 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 VIL1P09327 827 aaKnown RBP2.76□□□□□ -1.97
SGMS1-205ENST00000498514 CREB1P16220 341 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 TBXAS1P24557 533 aaPredicted RBP2.76□□□□□ -1.97
SGMS1-205ENST00000498514 ARRB2P32121 409 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 MAP2K6P52564 334 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 GAS1P54826 345 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 WNT3P56703 355 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 PPATQ06203 517 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 SLC14A1Q13336 389 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 CCNIQ14094 377 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 KEAP1Q14145 624 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 PLS1Q14651 629 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 PCBP2Q15366 365 aaKnown RBP eCLIP2.76□□□□□ -1.97
SGMS1-205ENST00000498514 PFKFB3Q16875 520 aaPredicted RBP2.76□□□□□ -1.97
SGMS1-205ENST00000498514 OTUD3Q5T2D3 398 aaPredicted RBP2.76□□□□□ -1.97
SGMS1-205ENST00000498514 NPNTQ6UXI9 565 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 FAM57BQ71RH2 274 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 MIER2Q8N344 545 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 PPP2R3CQ969Q6 453 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 MIB2Q96AX9 1013 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 CTHRC1Q96CG8 243 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 TUBB6Q9BUF5 446 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 SCNM1Q9BWG6 230 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 PCDHA7Q9UN72 937 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 USP22Q9UPT9 525 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 NOTCH3Q9UM47 2321 aa2.76□□□□□ -1.97
SGMS1-205ENST00000498514 FER1L4A9Z1Z3 1794 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 SHTN1A0MZ66 631 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 ZNF814B7Z6K7 855 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 DTNBO60941 627 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 ZC3H11AO75152 810 aaKnown RBP eCLIP2.75□□□□□ -1.97
SGMS1-205ENST00000498514 PLGP00747 810 aaPredicted RBP2.75□□□□□ -1.97
SGMS1-205ENST00000498514 HOXB2P14652 356 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 PDCP20941 246 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 KCNJ4P48050 445 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 POLD2P49005 469 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 ENTPD1P49961 510 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 P2RX3P56373 397 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 LTBQ06643 244 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 MFSD13AQ14CX5 517 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 ABCB5Q2M3G0 1257 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 KHDC1LQ5JSQ8 128 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 CERCAMQ5T4B2 595 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 NECAB2Q7Z6G3 386 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 PNMA8AQ86V59 439 aaPredicted RBP2.75□□□□□ -1.97
SGMS1-205ENST00000498514 COL23A1Q86Y22 540 aaPredicted RBP2.75□□□□□ -1.97
SGMS1-205ENST00000498514 TMEM199Q8N511 208 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 BPIFB1Q8TDL5 484 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 BCAS4Q8TDM0 211 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 HIC2Q96JB3 615 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 GBA2Q9HCG7 927 aaPredicted RBP2.75□□□□□ -1.97
SGMS1-205ENST00000498514 SARS2Q9NP81 518 aaKnown RBP2.75□□□□□ -1.97
SGMS1-205ENST00000498514 CD93Q9NPY3 652 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 ICAM5Q9UMF0 924 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 PCDHA6Q9UN73 950 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 PCDHA12Q9UN75 941 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 COG5Q9UP83 839 aa2.75□□□□□ -1.97
SGMS1-205ENST00000498514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.75□□□□□ -1.97
SGMS1-205ENST00000498514 TLX3O43711 291 aaPredicted RBP2.74□□□□□ -1.97
SGMS1-205ENST00000498514 ZNF432O94892 652 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 CGAP01215 116 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 THP07101 528 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 PRKAR1BP31321 381 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 MLH1P40692 756 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 SLC11A2P49281 568 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 BCAT1P54687 386 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 NKX6-1P78426 367 aaPredicted RBP2.74□□□□□ -1.97
SGMS1-205ENST00000498514 PTGR1Q14914 329 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 KRT71Q3SY84 523 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 CCDC157Q569K6 752 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 SYDE2Q5VT97 1194 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 NADSYN1Q6IA69 706 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 GAS2L3Q86XJ1 694 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 SPARTQ8N0X7 666 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 PRR18Q8N4B5 295 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 SLC44A5Q8NCS7 719 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 JPH3Q8WXH2 748 aaPredicted RBP2.74□□□□□ -1.97
SGMS1-205ENST00000498514 TRMT61AQ96FX7 289 aaKnown RBP2.74□□□□□ -1.97
SGMS1-205ENST00000498514 SF3B5Q9BWJ5 86 aaKnown RBP2.74□□□□□ -1.97
SGMS1-205ENST00000498514 RBM38Q9H0Z9 239 aaKnown RBP2.74□□□□□ -1.97
SGMS1-205ENST00000498514 PLSCR4Q9NRQ2 329 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 ZSCAN32Q9NX65 697 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 TBX22Q9Y458 520 aa2.74□□□□□ -1.97
SGMS1-205ENST00000498514 TRIP12Q14669 1992 aaPredicted RBP2.73□□□□□ -1.97
SGMS1-205ENST00000498514 AKAP10O43572 662 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 SPRY2O43597 315 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 PLAUP00749 431 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 RHCEP18577 417 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 KRTAP10-12P60413 245 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 EGR4Q05215 589 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 PTCHD3Q3KNS1 767 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 PLA1AQ53H76 456 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 RBM23Q86U06 439 aaKnown RBP2.73□□□□□ -1.97
SGMS1-205ENST00000498514 DNAJC5GQ8N7S2 189 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms