RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 C4BP0C0L5 1744 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 DBTP11182 482 aaKnown RBP12.07□□□□□ -0.48
PBX1-211ENST00000498497 ALDH4A1P30038 563 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 RAD23AP54725 363 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 OTOP3Q7RTS5 596 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 MMAAQ8IVH4 418 aaKnown RBP12.07□□□□□ -0.48
PBX1-211ENST00000498497 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
PBX1-211ENST00000498497 PCYOX1LQ8NBM8 494 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 SPATA18Q8TC71 538 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 CTRCQ99895 268 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 PKP2Q99959 881 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 POLR1BQ9H9Y6 1135 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 CXorf21Q9HAI6 301 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 SMG5Q9UPR3 1016 aaKnown RBP12.07□□□□□ -0.48
PBX1-211ENST00000498497 A8MUA0 341 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 E9PMD0 336 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 MAGEB2O15479 319 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 MAN1A2O60476 641 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 MT-ND3P03897 115 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 BST1Q10588 318 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 EPC2Q52LR7 807 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 RINT1Q6NUQ1 792 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 OFCC1Q8IZS5 231 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 ELMOD1Q8N336 334 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 GALNT6Q8NCL4 622 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 MAP6Q96JE9 813 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 CIB1Q99828 191 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 TRPV6Q9H1D0 765 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 NWD2Q9ULI1 1742 aa12.07□□□□□ -0.48
PBX1-211ENST00000498497 FSCN2O14926 492 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 GNAO1P09471 354 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 CPA3P15088 417 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 ATF4P18848 351 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 KCNA1Q09470 495 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 FSTL1Q12841 308 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 PPP2R5DQ14738 602 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 RSBN1Q5VWQ0 802 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 SLC9A4Q6AI14 798 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 GPR180Q86V85 440 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 ZSCAN10Q96SZ4 725 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 TMEM260Q9NX78 707 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 ZDHHC7Q9NXF8 308 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 FOXN3O00409 490 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 CLOCKO15516 846 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 ANXA13P27216 316 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 SERPINB5P36952 375 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 ACADVLP49748 655 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 COPAP53621 1224 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 GPS1Q13098 491 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 FLOT2Q14254 428 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 BBS9Q3SYG4 887 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 ITIH5Q86UX2 942 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 CHPT1Q8WUD6 406 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 CFAP57Q96MR6 1250 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 SMARCAD1Q9H4L7 1026 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 RPAP3Q9H6T3 665 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 BLOC1S4Q9NUP1 217 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 WARS2Q9UGM6 360 aaKnown RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 AP4E1Q9UPM8 1137 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 RNF11Q9Y3C5 154 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 TTLL3Q9Y4R7 772 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 PCDHGA7Q9Y5G6 932 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 POTECB2RU33 542 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 H3BMQ9 156 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 MEIS1O00470 390 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 HDAC3O15379 428 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 RNMTO43148 476 aaKnown RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 DCXO43602 365 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 CCNT2O60583 730 aaKnown RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 CD58P19256 250 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 ITIH2P19823 946 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 MLLT10P55197 1068 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 BMPR2Q13873 1038 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 PTPN20Q4JDL3 420 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 CYFIP1Q7L576 1253 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 PASD1Q8IV76 773 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 THNSL1Q8IYQ7 743 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 LILRA2Q8N149 483 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 AHI1Q8N157 1196 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 CADM2Q8N3J6 435 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 CCDC120Q96HB5 630 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 COG8Q96MW5 612 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 NT5C1BQ96P26 610 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 VPS35Q96QK1 796 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 C7orf25Q9BPX7 421 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 SOX17Q9H6I2 414 aaPredicted RBP12.06□□□□□ -0.48
PBX1-211ENST00000498497 PCDH10Q9P2E7 1040 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 IGSF9Q9P2J2 1179 aa12.06□□□□□ -0.48
PBX1-211ENST00000498497 FZD1Q9UP38 647 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms